Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 RNU6-202P-201ENST00000515998 96 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 RPL7P50-201ENST00000600588 727 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC002487.1-201ENST00000604565 994 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 OR7A19P-201ENST00000608051 733 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC124016.2-201ENST00000610058 665 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 MIR6768-201ENST00000610734 72 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 EIF3FP1-201ENST00000613970 806 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC026368.1-201ENST00000614934 690 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC105227.2-201ENST00000615075 605 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 RMST_9.1-201ENST00000619945 193 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC139713.2-210ENST00000641741 992 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 SAMMSON-226ENST00000642089 1582 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 ZFRP1-201ENST00000457579 2970 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AL590763.1-201ENST00000398297 1545 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 RNU6-236P-201ENST00000363886 106 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 SNORA74A-201ENST00000364089 198 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 RPL23AP48-201ENST00000406913 488 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 SNORA11.5-201ENST00000408163 128 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC092638.1-201ENST00000411966 1275 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 CHEK2P3-201ENST00000416118 248 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC008280.1-201ENST00000418851 412 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 OR4F13P-201ENST00000428478 931 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 RPL21P91-201ENST00000429231 479 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC234064.1-201ENST00000436312 247 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC092647.3-201ENST00000443044 633 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC112498.1-201ENST00000444401 332 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 EEF1B2P5-201ENST00000444820 548 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 NDUFS5P3-201ENST00000450668 321 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 RPL7P32-201ENST00000457119 744 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 RPS15AP1-201ENST00000457423 391 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 RPS26P28-201ENST00000470806 348 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC093270.2-201ENST00000486157 792 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC091860.1-201ENST00000505723 432 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 OR51K1P-201ENST00000510214 950 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 MTND5P21-201ENST00000531961 522 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC007225.2-201ENST00000562529 256 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC090666.1-201ENST00000578241 445 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC091178.1-203ENST00000584586 279 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC008759.1-201ENST00000589783 983 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 OR6R2P-201ENST00000609216 300 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AL356121.2-201ENST00000624715 780 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 AL627171.1-201ENST00000618845 1308 ntBASIC4.42□□□□□ -1.7
VPS33AQ96AX1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VPS33AQ96AX1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.41□□□□□ -1.7
VPS33AQ96AX1 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
VPS33AQ96AX1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms