Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MIR4310-201ENST00000582950 57 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 OR1AB1P-201ENST00000585564 761 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 AC011477.5-201ENST00000586571 259 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 AC090330.1-201ENST00000588646 764 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.06□□□□□ -1.76
RFT1Q96AA3 AC068790.5-201ENST00000602741 355 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 AL139395.1-201ENST00000603662 160 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 AC011453.2-201ENST00000603737 729 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 AC011458.1-201ENST00000604034 617 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 SUMO2P15-201ENST00000604285 278 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.06□□□□□ -1.76
RFT1Q96AA3 AC007497.1-201ENST00000610421 561 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 AL121612.2-201ENST00000612261 482 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 uc_338.32-201ENST00000615087 172 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 MIR6826-201ENST00000617808 98 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFT1Q96AA3 AL049777.1-201ENST00000622740 518 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 AP003476.1-201ENST00000623984 516 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFT1Q96AA3 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.06□□□□□ -1.76
RFT1Q96AA3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFT1Q96AA3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RFT1Q96AA3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFT1Q96AA3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFT1Q96AA3 SAMMSON-226ENST00000642089 1582 ntBASIC4.06□□□□□ -1.76
RFT1Q96AA3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 RNU5B-1-201ENST00000363286 116 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 SNORD74.4-201ENST00000364129 80 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 MIR525-201ENST00000384978 85 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 MIR513A2-201ENST00000385249 127 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 SNORA11.3-201ENST00000408471 128 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 HMGB1P45-201ENST00000435986 653 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 AL645931.1-201ENST00000439737 410 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 EEF1B2P5-201ENST00000444820 548 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 HMGB1P48-201ENST00000446155 598 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 TRY2P-201ENST00000448860 689 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 AP000926.1-201ENST00000479573 241 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC106872.2-201ENST00000494303 480 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC092045.1-201ENST00000495716 1231 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 IFITM8P-201ENST00000522529 394 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC022790.1-201ENST00000522872 204 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 GCSHP4-201ENST00000538792 439 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 MIR5699-201ENST00000578903 90 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC022726.1-201ENST00000587475 207 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC011492.1-201ENST00000600023 315 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 FAM27B-201ENST00000610601 213 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 AL138721.1-201ENST00000616756 179 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 SNORA11.6-201ENST00000619030 128 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.05□□□□□ -1.76
RFT1Q96AA3 AP000843.1-201ENST00000624880 701 ntBASIC4.05□□□□□ -1.76
RFT1Q96AA3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFT1Q96AA3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFT1Q96AA3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC025263.3-201ENST00000622965 1396 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFT1Q96AA3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC090229.1-201ENST00000590983 1609 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 RNU6-549P-201ENST00000384433 107 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 AL589647.1-201ENST00000402485 466 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RFT1Q96AA3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 RN7SKP167-201ENST00000411047 285 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AL645608.4-201ENST00000423619 154 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 NANOGP6-201ENST00000429190 847 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 RPL37P1-201ENST00000432310 284 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms