Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AL392003.1-201ENST00000434394 243 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 GSTA7P-201ENST00000438425 448 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 TPTE2P3-201ENST00000441562 1189 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 VN1R25P-201ENST00000443385 738 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 C1DP3-201ENST00000455013 423 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 VN1R40P-201ENST00000455196 941 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC068305.1-201ENST00000497406 726 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 FTH1P9-201ENST00000513251 355 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC069366.1-201ENST00000583159 838 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC068020.1-201ENST00000594215 661 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC090953.1-201ENST00000604305 1092 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC010200.2-201ENST00000605098 235 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AP000255.1-201ENST00000610276 676 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC090506.2-201ENST00000624521 419 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 MIR6830-201ENST00000636015 70 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC65Q8IXS2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 HMGB3P19-201ENST00000403971 560 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 HMGB1P32-201ENST00000425971 565 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 YWHAEP5-201ENST00000431545 765 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AC009220.1-201ENST00000451614 275 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 RPS23P7-201ENST00000466210 444 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AC026979.1-201ENST00000492525 396 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 HNRNPKP5-201ENST00000515300 253 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 RNU6-319P-201ENST00000516025 108 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 MIR4644-201ENST00000579929 84 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AC006338.2-201ENST00000616864 791 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 RMST_5.1-201ENST00000618704 126 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AC233309.1-201ENST00000619522 751 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 MIR6758-201ENST00000620653 63 ntBASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC65Q8IXS2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC65Q8IXS2 AC087565.3-202ENST00000642085 1603 ntBASIC4.46□□□□□ -1.69
CCDC65Q8IXS2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 RPL32P3-201ENST00000359025 275 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 MIR141-201ENST00000384975 95 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 RPS26P8-201ENST00000393490 348 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC093084.1-201ENST00000424233 687 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC234779.1-201ENST00000425910 285 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 H2AFZP6-201ENST00000444403 394 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 HMGB1P16-201ENST00000447155 540 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 RN7SL860P-201ENST00000473738 223 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 RPL31P61-201ENST00000496160 376 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 RN7SKP122-201ENST00000515923 296 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 SEC11B-201ENST00000518383 499 ntBASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC65Q8IXS2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms