Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 OR9K1P-201ENST00000326513 941 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 SNORA17.1-201ENST00000362945 126 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 RNU6-1042P-201ENST00000384204 107 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 MIR223-201ENST00000385204 110 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 MIR1178-201ENST00000408396 91 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 RN7SKP126-201ENST00000411143 300 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 RPL21P108-201ENST00000413857 481 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 TCEA1P4-201ENST00000415066 844 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC007435.1-201ENST00000421086 415 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AL139148.1-201ENST00000427122 680 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 MTND3P21-201ENST00000433774 331 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 GAPDHP58-201ENST00000438477 1006 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 ARAFP2-201ENST00000440565 559 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 MTCO2P25-201ENST00000447065 681 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 EPS15P1-201ENST00000448836 336 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 RPL36AP33-201ENST00000450395 310 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 GAPDHP14-201ENST00000450472 937 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 PRPF38AP1-201ENST00000451976 933 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC092647.2-201ENST00000452998 253 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 SSXP1-201ENST00000453640 473 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 CBX1P2-201ENST00000453841 458 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AL389915.2-201ENST00000454576 441 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC018638.3-201ENST00000461273 132 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 RN7SL727P-201ENST00000482164 296 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC041039.1-201ENST00000485656 536 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC097173.1-201ENST00000505862 819 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC114781.4-201ENST00000513707 639 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 TCP11X3P-202ENST00000514289 1254 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 RNA5SP34-201ENST00000516887 130 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 NPM1P6-201ENST00000521088 871 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 OR5AK3P-201ENST00000527486 1297 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC004825.1-201ENST00000555068 586 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AL049870.4-201ENST00000555741 486 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 MIR4666A-201ENST00000580160 79 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AP001542.2-201ENST00000593141 364 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC068020.1-201ENST00000594215 661 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 BNIP3P33-201ENST00000598912 569 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC130352.1-201ENST00000602979 661 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC068276.1-201ENST00000605793 379 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AP000894.4-201ENST00000610185 483 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 RPSAP73-201ENST00000614820 330 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AL136981.2-201ENST00000617319 734 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AL357080.1-201ENST00000617394 239 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC099654.14-201ENST00000638599 341 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC073869.7-201ENST00000640874 297 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AL590763.1-201ENST00000398297 1545 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.06□□□□□ -1.6
VRK3Q8IV63 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VRK3Q8IV63 CASC19-206ENST00000641028 1430 ntBASIC5.06□□□□□ -1.6
VRK3Q8IV63 AC020633.1-201ENST00000468439 2247 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 OR9K1P-202ENST00000641111 3217 ntBASIC5.05□□□□□ -1.6
VRK3Q8IV63 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
VRK3Q8IV63 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.05□□□□□ -1.6
VRK3Q8IV63 RPL23P2-201ENST00000320371 421 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms