Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 PARP4P1-201ENST00000435945 2337 ntBASIC7.55□□□□□ -1.2
RC3H1Q5TC82 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.55□□□□□ -1.2
RC3H1Q5TC82 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AL731556.1-201ENST00000394628 3711 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 GAPDHP24-201ENST00000328713 983 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 Y_RNA.159-201ENST00000363674 87 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 SNORA70-201ENST00000384436 135 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 RNU6-809P-201ENST00000384461 107 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 RNU6-1106P-201ENST00000390845 107 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 RNU6-316P-201ENST00000391027 107 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 RNU2-3P-201ENST00000410144 191 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 NPM1P40-201ENST00000412758 733 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 RPL36AP53-201ENST00000432891 316 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 SKP1P1-201ENST00000438081 489 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 FRG2FP-204ENST00000453982 852 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AC005741.1-201ENST00000511094 432 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 MTND5P4-201ENST00000514978 288 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 RNA5SP216-201ENST00000516111 123 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 RNU6-445P-201ENST00000516949 107 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 RNU6-1271P-201ENST00000517049 105 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AC068714.1-201ENST00000559623 800 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 AL356585.4-201ENST00000623078 1229 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 CD36-221ENST00000534394 1741 ntTSL 2 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 CTAGE11P-201ENST00000451540 2353 ntBASIC7.54□□□□□ -1.2
RC3H1Q5TC82 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RC3H1Q5TC82 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AC107982.1-201ENST00000507171 1300 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 MTCO1P12-201ENST00000414273 1543 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 CISD1P1-201ENST00000393907 327 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 SPA17P1-201ENST00000416656 452 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 BEND7P1-201ENST00000422058 457 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 RPL31P35-201ENST00000431058 377 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AL513175.1-201ENST00000431492 780 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 U8.20-201ENST00000459445 131 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AL135752.1-201ENST00000479477 471 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 UBA52P7-201ENST00000486088 380 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AC023194.1-201ENST00000493084 308 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AC048346.1-201ENST00000510247 144 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 Y_RNA.672-201ENST00000516289 104 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AL121594.2-201ENST00000541658 472 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 FKBP1AP1-201ENST00000594588 318 ntBASIC7.53□□□□□ -1.2
RC3H1Q5TC82 ALG13-230ENST00000623189 458 ntTSL 3 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RC3H1Q5TC82 LINC02019-201ENST00000608605 2060 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms