Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PTCHD3Q3KNS1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTCHD3Q3KNS1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.98□□□□□ -1.61
PTCHD3Q3KNS1 AC104623.2-202ENST00000623477 4002 ntBASIC4.98□□□□□ -1.61
PTCHD3Q3KNS1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PTCHD3Q3KNS1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.98□□□□□ -1.61
PTCHD3Q3KNS1 SAMMSON-213ENST00000641336 1521 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC010329.2-201ENST00000595195 2737 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 CASC19-204ENST00000641001 2055 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC011447.7-201ENST00000624228 1590 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 MTND4P34-201ENST00000572715 1371 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 Y_RNA.77-201ENST00000362962 107 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 RN7SKP149-201ENST00000363008 344 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 MIR550A3-201ENST00000390735 95 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 U3.32-201ENST00000408116 212 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AL450992.3-201ENST00000413192 568 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 P2RY10P2-201ENST00000416730 913 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 COX6CP13-201ENST00000428703 226 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 MTCO2P7-201ENST00000446518 666 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 RPL35AP28-201ENST00000459730 331 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC091180.1-201ENST00000462104 372 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 RN7SL97P-201ENST00000486780 299 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC005912.1-201ENST00000495392 255 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC004980.4-201ENST00000513375 203 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC008494.2-201ENST00000514544 370 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 RN7SKP31-201ENST00000516354 278 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 RNU6-759P-201ENST00000516740 103 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 RN7SKP147-201ENST00000517154 244 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC068993.1-201ENST00000546724 589 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 OR1F2P-201ENST00000570470 933 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC006539.2-201ENST00000601729 572 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 OR2AS2P-201ENST00000606902 342 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC234782.5-201ENST00000617723 324 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC091931.1-201ENST00000623488 728 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 FP325313.1-201ENST00000638228 703 ntBASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTCHD3Q3KNS1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.96□□□□□ -1.61
PTCHD3Q3KNS1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 SNORA2.3-201ENST00000383920 135 ntBASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 RPS3AP26-201ENST00000398259 784 ntBASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 AL035407.1-201ENST00000429211 571 ntBASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 RBMY2QP-201ENST00000429799 1147 ntBASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 THAP5P1-201ENST00000439089 262 ntBASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 ELOCP8-201ENST00000439309 332 ntBASIC4.96□□□□□ -1.62
PTCHD3Q3KNS1 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms