Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.19□□□□□ -1.74
SIX1Q15475 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.19□□□□□ -1.74
SIX1Q15475 CALM1P2-201ENST00000452941 448 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 AC009963.2-201ENST00000453431 138 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 RN7SL385P-201ENST00000468873 276 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 AC013356.1-201ENST00000489027 564 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 BTF3L4P4-201ENST00000506381 449 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.19□□□□□ -1.74
SIX1Q15475 AC107016.1-201ENST00000550463 337 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX1Q15475 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX1Q15475 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX1Q15475 CBX3P2-202ENST00000583365 535 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 MRPS35P3-201ENST00000603189 709 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 ABI1P1-201ENST00000603375 1120 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 AC004241.3-201ENST00000611728 517 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
SIX1Q15475 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SIX1Q15475 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SIX1Q15475 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIX1Q15475 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIX1Q15475 UBE3AP2-201ENST00000429033 2259 ntBASIC4.19□□□□□ -1.74
SIX1Q15475 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIX1Q15475 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX1Q15475 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 ZNF90P1-201ENST00000480493 1951 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 FAM35DP-201ENST00000323387 2712 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 AC083899.2-201ENST00000423285 1376 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 RNU4-7P-201ENST00000364758 141 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 RNU1-89P-201ENST00000384592 164 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 MIR137-201ENST00000385223 102 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 ZNF603P-201ENST00000405613 487 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX1Q15475 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX1Q15475 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX1Q15475 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX1Q15475 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX1Q15475 USP12PY-201ENST00000427677 1064 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 NDUFA5P10-201ENST00000432147 357 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 KCTD9P3-201ENST00000434597 1169 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX1Q15475 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX1Q15475 MOB1AP2-201ENST00000446060 614 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 RPL10P17-201ENST00000453852 316 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 RPL7AP52-201ENST00000458096 790 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX1Q15475 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX1Q15475 AC113430.1-201ENST00000506872 718 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX1Q15475 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX1Q15475 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX1Q15475 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX1Q15475 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX1Q15475 BNIP3P27-201ENST00000599991 412 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 BNIP3P39-201ENST00000601077 554 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX1Q15475 MTATP6P2-201ENST00000603319 678 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 RMST_9.1-201ENST00000619945 193 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 AP001005.3-201ENST00000622049 129 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 AP000943.4-201ENST00000622912 357 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX1Q15475 AC139713.2-214ENST00000642059 1811 ntBASIC4.18□□□□□ -1.74
SIX1Q15475 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
SIX1Q15475 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX1Q15475 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX1Q15475 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SIX1Q15475 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX1Q15475 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX1Q15475 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SIX1Q15475 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX1Q15475 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX1Q15475 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX1Q15475 IGKV7-3-201ENST00000357453 298 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 SNORD35B-201ENST00000363660 87 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SIX1Q15475 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SIX1Q15475 AL035405.1-201ENST00000400795 710 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX1Q15475 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX1Q15475 MTCO2P1-201ENST00000424648 477 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AC234779.1-201ENST00000425910 285 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AL512637.2-201ENST00000431287 1256 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms