Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CX3CL1P78423 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 LRRC37BP1-201ENST00000398851 714 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 Z97832.1-201ENST00000402490 328 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 RN7SKP247-201ENST00000411094 308 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 GJA6P-201ENST00000415117 1042 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC008280.1-201ENST00000418851 412 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AC233981.1-201ENST00000423224 461 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 RPP40P1-201ENST00000426762 456 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC105402.2-201ENST00000438503 358 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 RPL34P20-201ENST00000442771 351 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 MTCYBP16-201ENST00000509187 1129 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AC008837.2-201ENST00000513076 418 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 RNA5SP249-201ENST00000516127 99 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 RN7SKP147-201ENST00000517154 244 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 SOD1P3-201ENST00000518682 454 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC087808.1-201ENST00000520501 361 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC023050.2-201ENST00000544968 387 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC022069.1-201ENST00000582910 658 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.97□□□□□ -1.77
CX3CL1P78423 RN7SL52P-201ENST00000584271 284 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 Z99289.3-201ENST00000605586 594 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC093799.2-201ENST00000610062 578 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 SDR42E1P1-201ENST00000611327 477 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AC021755.4-201ENST00000616620 456 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AC022509.4-201ENST00000621404 572 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AP002791.1-201ENST00000623291 381 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CX3CL1P78423 AC007529.1-201ENST00000418574 2178 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CX3CL1P78423 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CX3CL1P78423 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CX3CL1P78423 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 ECM1P2-201ENST00000503354 1577 ntBASIC3.97□□□□□ -1.77
CX3CL1P78423 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.97□□□□□ -1.77
CX3CL1P78423 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.96□□□□□ -1.77
CX3CL1P78423 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.96□□□□□ -1.77
CX3CL1P78423 DBF4P1-201ENST00000412976 1892 ntBASIC3.96□□□□□ -1.77
CX3CL1P78423 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.96□□□□□ -1.77
CX3CL1P78423 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CX3CL1P78423 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.96□□□□□ -1.78
CX3CL1P78423 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CL1P78423 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CL1P78423 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CX3CL1P78423 RNU6-115P-201ENST00000364310 107 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CX3CL1P78423 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CX3CL1P78423 TAS2R15P-201ENST00000390674 928 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 RNU6-1300P-201ENST00000391046 108 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 DSTNP4-201ENST00000399472 474 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 MTCO3P31-201ENST00000405526 789 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 FCF1P5-201ENST00000406490 482 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AL512430.2-201ENST00000406786 339 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 RN7SKP213-201ENST00000410746 298 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AL136133.1-201ENST00000413694 376 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AL161449.1-201ENST00000414531 1199 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 FCF1P2-201ENST00000415284 583 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC093162.1-201ENST00000419682 124 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AL358176.3-201ENST00000420757 454 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AC005005.2-201ENST00000420779 380 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 MRPS36P1-201ENST00000421291 307 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.96□□□□□ -1.78
CX3CL1P78423 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CX3CL1P78423 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.96□□□□□ -1.78
CX3CL1P78423 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.96□□□□□ -1.78
CX3CL1P78423 AL513175.1-201ENST00000431492 780 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AC092647.3-201ENST00000443044 633 ntBASIC3.96□□□□□ -1.78
CX3CL1P78423 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms