Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC104164.2-201ENST00000496953 495 ntBASIC3.47□□□□□ -1.85
UBA52P62987 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
UBA52P62987 RNU6-964P-201ENST00000516524 69 ntBASIC3.47□□□□□ -1.85
UBA52P62987 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.47□□□□□ -1.85
UBA52P62987 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
UBA52P62987 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.47□□□□□ -1.85
UBA52P62987 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.47□□□□□ -1.85
UBA52P62987 AC068446.3-201ENST00000555285 382 ntBASIC3.47□□□□□ -1.85
UBA52P62987 GNRHR2P1-201ENST00000555315 631 ntBASIC3.47□□□□□ -1.85
UBA52P62987 RN7SL600P-201ENST00000581811 299 ntBASIC3.47□□□□□ -1.85
UBA52P62987 AC006116.5-201ENST00000591936 559 ntBASIC3.47□□□□□ -1.85
UBA52P62987 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.47□□□□□ -1.85
UBA52P62987 AL161729.3-201ENST00000603533 673 ntBASIC3.47□□□□□ -1.85
UBA52P62987 AC104662.1-201ENST00000604448 511 ntBASIC3.47□□□□□ -1.85
UBA52P62987 RNU4-89P-201ENST00000607443 133 ntBASIC3.47□□□□□ -1.85
UBA52P62987 AL391261.4-201ENST00000616012 481 ntBASIC3.47□□□□□ -1.85
UBA52P62987 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.47□□□□□ -1.85
UBA52P62987 TNPO1P3-201ENST00000436471 2662 ntBASIC3.47□□□□□ -1.85
UBA52P62987 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
UBA52P62987 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
UBA52P62987 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UBA52P62987 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
UBA52P62987 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
UBA52P62987 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UBA52P62987 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
UBA52P62987 MIR1179-201ENST00000408703 91 ntBASIC3.46□□□□□ -1.86
UBA52P62987 AL450992.3-201ENST00000413192 568 ntBASIC3.46□□□□□ -1.86
UBA52P62987 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UBA52P62987 AC108032.1-201ENST00000416706 207 ntBASIC3.46□□□□□ -1.86
UBA52P62987 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.46□□□□□ -1.86
UBA52P62987 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UBA52P62987 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.46□□□□□ -1.86
UBA52P62987 COX6B1P7-201ENST00000430845 235 ntBASIC3.46□□□□□ -1.86
UBA52P62987 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.46□□□□□ -1.86
UBA52P62987 AC092809.1-201ENST00000441469 474 ntBASIC3.46□□□□□ -1.86
UBA52P62987 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UBA52P62987 AL512326.1-201ENST00000443050 721 ntBASIC3.46□□□□□ -1.86
UBA52P62987 VN1R25P-201ENST00000443385 738 ntBASIC3.46□□□□□ -1.86
UBA52P62987 VN1R34P-201ENST00000447387 883 ntBASIC3.46□□□□□ -1.86
UBA52P62987 RPL5P32-201ENST00000454085 879 ntBASIC3.46□□□□□ -1.86
UBA52P62987 VN1R40P-201ENST00000455196 941 ntBASIC3.46□□□□□ -1.86
UBA52P62987 AC091959.2-201ENST00000477363 321 ntBASIC3.46□□□□□ -1.86
UBA52P62987 AC068305.1-201ENST00000497406 726 ntBASIC3.46□□□□□ -1.86
UBA52P62987 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
UBA52P62987 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.46□□□□□ -1.86
UBA52P62987 ATP1B1P1-201ENST00000509767 915 ntBASIC3.46□□□□□ -1.86
UBA52P62987 USP9YP5-201ENST00000511770 630 ntBASIC3.46□□□□□ -1.86
UBA52P62987 AC108064.1-201ENST00000513791 460 ntBASIC3.46□□□□□ -1.86
UBA52P62987 AC105233.3-201ENST00000531125 744 ntBASIC3.46□□□□□ -1.86
UBA52P62987 AC063950.1-201ENST00000552036 308 ntBASIC3.46□□□□□ -1.86
UBA52P62987 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UBA52P62987 AC007599.1-201ENST00000568688 1174 ntBASIC3.46□□□□□ -1.86
UBA52P62987 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.46□□□□□ -1.86
UBA52P62987 BMS1P7-201ENST00000602440 1052 ntBASIC3.46□□□□□ -1.86
UBA52P62987 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.46□□□□□ -1.86
UBA52P62987 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
UBA52P62987 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.46□□□□□ -1.86
UBA52P62987 MIR6875-201ENST00000617506 72 ntBASIC3.46□□□□□ -1.86
UBA52P62987 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
UBA52P62987 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
UBA52P62987 AC093909.5-201ENST00000621839 1799 ntBASIC3.46□□□□□ -1.86
UBA52P62987 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.45□□□□□ -1.86
UBA52P62987 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.45□□□□□ -1.86
UBA52P62987 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.45□□□□□ -1.86
UBA52P62987 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.45□□□□□ -1.86
UBA52P62987 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
UBA52P62987 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.45□□□□□ -1.86
UBA52P62987 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
UBA52P62987 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.45□□□□□ -1.86
UBA52P62987 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
UBA52P62987 AC011155.1-201ENST00000316512 456 ntBASIC3.45□□□□□ -1.86
UBA52P62987 RNU1-14P-201ENST00000362759 152 ntBASIC3.45□□□□□ -1.86
UBA52P62987 RNA5SP175-201ENST00000364275 119 ntBASIC3.45□□□□□ -1.86
UBA52P62987 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 RPL21P65-201ENST00000406094 466 ntBASIC3.45□□□□□ -1.86
UBA52P62987 RNA5SP36-201ENST00000410197 133 ntBASIC3.45□□□□□ -1.86
UBA52P62987 RN7SKP33-201ENST00000410942 340 ntBASIC3.45□□□□□ -1.86
UBA52P62987 CYCSP19-201ENST00000411715 316 ntBASIC3.45□□□□□ -1.86
UBA52P62987 AC127526.1-201ENST00000417526 366 ntBASIC3.45□□□□□ -1.86
UBA52P62987 AL159169.1-201ENST00000421119 127 ntBASIC3.45□□□□□ -1.86
UBA52P62987 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 DPY19L1P2-201ENST00000426647 915 ntBASIC3.45□□□□□ -1.86
UBA52P62987 AC006946.1-201ENST00000429106 328 ntBASIC3.45□□□□□ -1.86
UBA52P62987 ARL4AP4-201ENST00000434170 518 ntBASIC3.45□□□□□ -1.86
UBA52P62987 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 AC239798.3-201ENST00000454459 408 ntBASIC3.45□□□□□ -1.86
UBA52P62987 EIF2S2P4-201ENST00000461070 984 ntBASIC3.45□□□□□ -1.86
UBA52P62987 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.45□□□□□ -1.86
UBA52P62987 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.45□□□□□ -1.86
UBA52P62987 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.45□□□□□ -1.86
UBA52P62987 RNA5SP519-201ENST00000516480 119 ntBASIC3.45□□□□□ -1.86
UBA52P62987 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.45□□□□□ -1.86
UBA52P62987 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.45□□□□□ -1.86
UBA52P62987 OR5BC1P-201ENST00000529327 739 ntBASIC3.45□□□□□ -1.86
UBA52P62987 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.45□□□□□ -1.86
UBA52P62987 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms