Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CLDN20P56880 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN20P56880 MTND4P10-201ENST00000446199 1363 ntBASIC4.36□□□□□ -1.71
CLDN20P56880 AC005261.4-201ENST00000600047 1385 ntBASIC4.36□□□□□ -1.71
CLDN20P56880 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN20P56880 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLDN20P56880 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN20P56880 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN20P56880 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN20P56880 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CLDN20P56880 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN20P56880 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLDN20P56880 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN20P56880 RNU1-20P-201ENST00000363314 162 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN20P56880 SNORA51.12-201ENST00000384448 134 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 U3.30-201ENST00000391308 210 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 GSTM3P2-201ENST00000412746 530 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 CEACAMP8-201ENST00000413902 580 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 OR4K6P-201ENST00000416478 897 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 RPS24P7-201ENST00000416921 246 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN20P56880 RPL7P4-203ENST00000430239 730 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN20P56880 AC092162.1-201ENST00000432828 434 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN20P56880 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN20P56880 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN20P56880 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN20P56880 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.35□□□□□ -1.71
CLDN20P56880 AC118282.2-201ENST00000508739 374 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AC113347.3-201ENST00000509113 148 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 RN7SKP283-201ENST00000517197 270 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN20P56880 AC023632.1-201ENST00000518463 375 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN20P56880 AC139103.1-201ENST00000534696 1030 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN20P56880 AC044913.1-201ENST00000557200 430 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 ATP5J2P6-201ENST00000565203 266 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN20P56880 SNORA74C-1-201ENST00000580726 201 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.35□□□□□ -1.71
CLDN20P56880 AC022726.1-201ENST00000587475 207 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 VN1R83P-201ENST00000595685 445 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 RPL26P30-202ENST00000602923 645 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AC021749.1-201ENST00000604322 607 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AC016877.3-201ENST00000606778 504 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 FAM27B-201ENST00000610601 213 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AC013470.4-201ENST00000619978 986 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AC087821.2-201ENST00000637086 450 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.35□□□□□ -1.71
CLDN20P56880 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CLDN20P56880 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN20P56880 AC025263.3-201ENST00000622965 1396 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN20P56880 NCLP2-201ENST00000416078 1462 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN20P56880 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLDN20P56880 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.35□□□□□ -1.71
CLDN20P56880 AL359922.3-201ENST00000624779 1670 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 AL672167.1-203ENST00000641299 2975 ntBASIC4.35□□□□□ -1.71
CLDN20P56880 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN20P56880 AC022031.1-201ENST00000585985 2593 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN20P56880 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN20P56880 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLDN20P56880 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLDN20P56880 OR1L1-202ENST00000373686 1083 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 MIR16-1-201ENST00000385271 89 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLDN20P56880 RNU6-1242P-201ENST00000391052 103 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AF228730.1-201ENST00000397972 663 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN20P56880 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN20P56880 AC114755.2-201ENST00000413520 361 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN20P56880 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN20P56880 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CLDN20P56880 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN20P56880 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN20P56880 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN20P56880 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN20P56880 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN20P56880 MRPL42P4-201ENST00000453267 443 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 RPL10P17-201ENST00000453852 316 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 RPL37P3-201ENST00000456825 293 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 MTCO2P6-201ENST00000463134 685 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 PRDX3P4-201ENST00000470828 747 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN20P56880 AC011037.1-201ENST00000483964 558 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 RPS4XP18-201ENST00000495480 763 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 RN7SL558P-201ENST00000497468 299 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN20P56880 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN20P56880 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN20P56880 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN20P56880 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN20P56880 RN7SKP276-201ENST00000516242 268 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms