Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CDH12P55289 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CDH12P55289 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH12P55289 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH12P55289 AL355852.1-201ENST00000454081 1771 ntBASIC4.48□□□□□ -1.69
CDH12P55289 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH12P55289 FAM3C2-201ENST00000312214 681 ntBASIC4.48□□□□□ -1.69
CDH12P55289 RPL23P2-201ENST00000320371 421 ntBASIC4.48□□□□□ -1.69
CDH12P55289 SNORD116-1-201ENST00000384335 95 ntBASIC4.48□□□□□ -1.69
CDH12P55289 SNORD96B-201ENST00000386148 79 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AL357515.1-201ENST00000402967 542 ntBASIC4.48□□□□□ -1.69
CDH12P55289 GSTA8P-201ENST00000404253 637 ntBASIC4.48□□□□□ -1.69
CDH12P55289 MIR1302-8-201ENST00000408342 128 ntBASIC4.48□□□□□ -1.69
CDH12P55289 RNU6-757P-201ENST00000410334 100 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH12P55289 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH12P55289 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH12P55289 AF186996.5-201ENST00000418098 904 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH12P55289 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH12P55289 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH12P55289 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH12P55289 AC073069.1-201ENST00000428657 441 ntBASIC4.48□□□□□ -1.69
CDH12P55289 DYNLL1P7-201ENST00000429273 258 ntBASIC4.48□□□□□ -1.69
CDH12P55289 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH12P55289 AL031663.1-201ENST00000437445 219 ntBASIC4.48□□□□□ -1.69
CDH12P55289 CNOT7P2-201ENST00000441051 832 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC092473.1-201ENST00000441098 221 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AL163193.1-201ENST00000444895 788 ntBASIC4.48□□□□□ -1.69
CDH12P55289 TDGF1P1-201ENST00000445734 527 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC000111.2-201ENST00000448200 210 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH12P55289 RPL21P134-201ENST00000453468 483 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH12P55289 RPL23AP71-201ENST00000470966 469 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC015724.1-201ENST00000478577 156 ntBASIC4.48□□□□□ -1.69
CDH12P55289 RPS27P23-201ENST00000487608 251 ntBASIC4.48□□□□□ -1.69
CDH12P55289 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH12P55289 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH12P55289 AC104090.1-201ENST00000506341 1171 ntBASIC4.48□□□□□ -1.69
CDH12P55289 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH12P55289 RNU6-709P-201ENST00000517257 104 ntBASIC4.48□□□□□ -1.69
CDH12P55289 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH12P55289 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH12P55289 AP000619.3-201ENST00000535634 1127 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC125611.1-201ENST00000549563 229 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC079075.1-201ENST00000559543 878 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC090888.1-201ENST00000561335 1141 ntBASIC4.48□□□□□ -1.69
CDH12P55289 TVP23CP2-201ENST00000571473 623 ntBASIC4.48□□□□□ -1.69
CDH12P55289 SNORA74C-1-201ENST00000580726 201 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH12P55289 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH12P55289 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH12P55289 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH12P55289 BNIP3P26-201ENST00000600827 554 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC015726.1-201ENST00000602353 681 ntBASIC4.48□□□□□ -1.69
CDH12P55289 NTAN1P1-201ENST00000603150 646 ntBASIC4.48□□□□□ -1.69
CDH12P55289 VIS1.1-201ENST00000610517 203 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC022467.1-201ENST00000614738 749 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AL603755.1-201ENST00000619504 163 ntBASIC4.48□□□□□ -1.69
CDH12P55289 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH12P55289 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH12P55289 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH12P55289 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CDH12P55289 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH12P55289 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH12P55289 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH12P55289 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH12P55289 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH12P55289 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH12P55289 AP000776.1-201ENST00000530032 1663 ntBASIC4.48□□□□□ -1.69
CDH12P55289 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH12P55289 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CDH12P55289 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH12P55289 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH12P55289 MAPK10-303ENST00000641324 3959 ntBASIC4.47□□□□□ -1.69
CDH12P55289 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH12P55289 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH12P55289 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH12P55289 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH12P55289 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH12P55289 RNU6-171P-201ENST00000384354 107 ntBASIC4.47□□□□□ -1.69
CDH12P55289 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH12P55289 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH12P55289 RNA5SP80-201ENST00000410475 111 ntBASIC4.47□□□□□ -1.69
CDH12P55289 NRBF2P2-201ENST00000413087 861 ntBASIC4.47□□□□□ -1.69
CDH12P55289 TBCAP2-201ENST00000416175 326 ntBASIC4.47□□□□□ -1.69
CDH12P55289 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH12P55289 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH12P55289 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH12P55289 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.47□□□□□ -1.69
CDH12P55289 AL593851.1-201ENST00000426171 157 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AC005033.1-201ENST00000428904 813 ntBASIC4.47□□□□□ -1.69
CDH12P55289 VN1R108P-201ENST00000431580 830 ntBASIC4.47□□□□□ -1.69
CDH12P55289 ATP5F1P1-201ENST00000433775 569 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AC093155.1-201ENST00000440164 826 ntBASIC4.47□□□□□ -1.69
CDH12P55289 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH12P55289 AL137845.2-201ENST00000444292 988 ntBASIC4.47□□□□□ -1.69
CDH12P55289 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms