Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COPB1P53618 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.11□□□□□ -1.59
COPB1P53618 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COPB1P53618 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COPB1P53618 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COPB1P53618 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COPB1P53618 RNA5SP372-201ENST00000390836 115 ntBASIC5.11□□□□□ -1.59
COPB1P53618 SNORA40.2-201ENST00000390847 128 ntBASIC5.11□□□□□ -1.59
COPB1P53618 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 AL590084.1-201ENST00000407885 387 ntBASIC5.11□□□□□ -1.59
COPB1P53618 VDAC1P9-201ENST00000412766 841 ntBASIC5.11□□□□□ -1.59
COPB1P53618 CEACAMP8-201ENST00000413902 580 ntBASIC5.11□□□□□ -1.59
COPB1P53618 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 PTP4A1P1-201ENST00000420539 515 ntBASIC5.11□□□□□ -1.59
COPB1P53618 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 AL590762.4-201ENST00000425885 253 ntBASIC5.11□□□□□ -1.59
COPB1P53618 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 AL365396.1-201ENST00000430854 671 ntBASIC5.11□□□□□ -1.59
COPB1P53618 YWHAEP5-201ENST00000431545 765 ntBASIC5.11□□□□□ -1.59
COPB1P53618 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.11□□□□□ -1.59
COPB1P53618 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.11□□□□□ -1.59
COPB1P53618 AC090142.1-201ENST00000465776 462 ntBASIC5.11□□□□□ -1.59
COPB1P53618 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.11□□□□□ -1.59
COPB1P53618 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 CR383656.6-201ENST00000550518 394 ntBASIC5.11□□□□□ -1.59
COPB1P53618 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.11□□□□□ -1.59
COPB1P53618 AL392112.1-201ENST00000605115 829 ntBASIC5.11□□□□□ -1.59
COPB1P53618 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 AC119674.1-212ENST00000641155 993 ntBASIC5.11□□□□□ -1.59
COPB1P53618 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.11□□□□□ -1.59
COPB1P53618 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 SAMMSON-226ENST00000642089 1582 ntBASIC5.11□□□□□ -1.59
COPB1P53618 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.11□□□□□ -1.59
COPB1P53618 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.11□□□□□ -1.59
COPB1P53618 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COPB1P53618 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 CASC19-204ENST00000641001 2055 ntBASIC5.11□□□□□ -1.59
COPB1P53618 MAPK10-263ENST00000641052 4307 ntBASIC5.11□□□□□ -1.59
COPB1P53618 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COPB1P53618 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COPB1P53618 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.1□□□□□ -1.59
COPB1P53618 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COPB1P53618 ENSAP3-201ENST00000312710 333 ntBASIC5.1□□□□□ -1.59
COPB1P53618 RN7SKP104-201ENST00000362605 328 ntBASIC5.1□□□□□ -1.59
COPB1P53618 RNU4-44P-201ENST00000363050 141 ntBASIC5.1□□□□□ -1.59
COPB1P53618 RNA5SP151-201ENST00000365632 117 ntBASIC5.1□□□□□ -1.59
COPB1P53618 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
COPB1P53618 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.1□□□□□ -1.59
COPB1P53618 RNU6-452P-201ENST00000384406 107 ntBASIC5.1□□□□□ -1.59
COPB1P53618 RNU6-185P-201ENST00000384421 107 ntBASIC5.1□□□□□ -1.59
COPB1P53618 RNU6-1263P-201ENST00000384601 106 ntBASIC5.1□□□□□ -1.59
COPB1P53618 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.1□□□□□ -1.59
COPB1P53618 MIR1302-8-201ENST00000408342 128 ntBASIC5.1□□□□□ -1.59
COPB1P53618 AC009237.10-201ENST00000414112 510 ntBASIC5.1□□□□□ -1.59
COPB1P53618 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.1□□□□□ -1.59
COPB1P53618 OR4K6P-201ENST00000416478 897 ntBASIC5.1□□□□□ -1.59
COPB1P53618 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.1□□□□□ -1.59
COPB1P53618 RBMY2KP-201ENST00000418221 992 ntBASIC5.1□□□□□ -1.59
COPB1P53618 DPY19L1P2-201ENST00000426647 915 ntBASIC5.1□□□□□ -1.59
COPB1P53618 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.1□□□□□ -1.59
COPB1P53618 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.1□□□□□ -1.59
COPB1P53618 FGF7P5-201ENST00000441829 291 ntBASIC5.1□□□□□ -1.59
COPB1P53618 H2AFZP6-201ENST00000444403 394 ntBASIC5.1□□□□□ -1.59
COPB1P53618 AL589765.3-201ENST00000446084 462 ntBASIC5.1□□□□□ -1.59
COPB1P53618 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.1□□□□□ -1.59
COPB1P53618 RPS5P7-201ENST00000456664 608 ntBASIC5.1□□□□□ -1.59
COPB1P53618 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.1□□□□□ -1.59
COPB1P53618 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.1□□□□□ -1.59
COPB1P53618 SEC63P2-201ENST00000503863 1939 ntBASIC5.1□□□□□ -1.59
COPB1P53618 SCARNA22-201ENST00000503991 125 ntBASIC5.1□□□□□ -1.59
COPB1P53618 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.1□□□□□ -1.59
COPB1P53618 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COPB1P53618 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.1□□□□□ -1.59
COPB1P53618 UGT2B26P-201ENST00000508672 1613 ntBASIC5.1□□□□□ -1.59
COPB1P53618 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.1□□□□□ -1.59
COPB1P53618 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
COPB1P53618 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.1□□□□□ -1.59
COPB1P53618 BTF3P13-201ENST00000513224 490 ntBASIC5.1□□□□□ -1.59
COPB1P53618 RNA5SP228-201ENST00000516232 133 ntBASIC5.1□□□□□ -1.59
COPB1P53618 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.1□□□□□ -1.59
COPB1P53618 PCNPP1-201ENST00000552501 511 ntBASIC5.1□□□□□ -1.59
COPB1P53618 BX005019.1-201ENST00000561881 1810 ntBASIC5.1□□□□□ -1.59
COPB1P53618 CYP2C60P-201ENST00000566088 139 ntBASIC5.1□□□□□ -1.59
COPB1P53618 AC027228.2-201ENST00000567141 2154 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms