Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.94□□□□□ -1.78
CXCL12P48061 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CXCL12P48061 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
CXCL12P48061 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.94□□□□□ -1.78
CXCL12P48061 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL12P48061 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL12P48061 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CXCL12P48061 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL12P48061 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.94□□□□□ -1.78
CXCL12P48061 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL12P48061 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CXCL12P48061 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.94□□□□□ -1.78
CXCL12P48061 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL12P48061 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CXCL12P48061 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.93□□□□□ -1.78
CXCL12P48061 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL12P48061 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CXCL12P48061 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL12P48061 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.93□□□□□ -1.78
CXCL12P48061 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL12P48061 Y_RNA.111-201ENST00000363248 100 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 OR52E6-202ENST00000379946 954 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 NDUFB4P4-201ENST00000404822 243 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 AC096644.3-201ENST00000416788 338 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 PTP4A1P1-201ENST00000420539 515 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.93□□□□□ -1.78
CXCL12P48061 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.93□□□□□ -1.78
CXCL12P48061 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.93□□□□□ -1.78
CXCL12P48061 AC018635.1-201ENST00000468292 1030 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 AC016687.1-201ENST00000482574 353 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 AP000926.3-201ENST00000497201 299 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.93□□□□□ -1.78
CXCL12P48061 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.93□□□□□ -1.78
CXCL12P48061 SCARNA14-201ENST00000516903 136 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL12P48061 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.93□□□□□ -1.78
CXCL12P48061 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.93□□□□□ -1.78
CXCL12P48061 AC084033.1-201ENST00000550830 633 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.93□□□□□ -1.78
CXCL12P48061 NPM1P47-201ENST00000560843 856 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.93□□□□□ -1.78
CXCL12P48061 MIR5187-201ENST00000583479 76 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 MIR3922-201ENST00000585192 84 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 AC011471.1-201ENST00000585766 187 ntBASIC3.93□□□□□ -1.78
CXCL12P48061 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.93□□□□□ -1.78
CXCL12P48061 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL12P48061 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL12P48061 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CXCL12P48061 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL12P48061 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL12P48061 CR382285.2-201ENST00000624662 1495 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
CXCL12P48061 CUL4AP1-201ENST00000514750 1863 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL12P48061 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CXCL12P48061 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL12P48061 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL12P48061 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CXCL12P48061 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CXCL12P48061 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL12P48061 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL12P48061 AL512430.2-201ENST00000406786 339 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 MIR1251-201ENST00000408552 70 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 RPL7AP73-201ENST00000413490 353 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.92□□□□□ -1.78
CXCL12P48061 AL034379.1-201ENST00000423216 253 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 HSFY1P1-201ENST00000423928 1178 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL12P48061 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL12P48061 AL159987.2-201ENST00000432754 307 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CXCL12P48061 MTND6P18-201ENST00000439477 513 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 EIF4A1P11-201ENST00000451239 222 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.92□□□□□ -1.78
CXCL12P48061 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.92□□□□□ -1.78
CXCL12P48061 AL133244.1-201ENST00000456007 258 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 MTCYBP14-201ENST00000457471 715 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 AC022795.1-201ENST00000473808 480 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CXCL12P48061 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL12P48061 AC113430.1-201ENST00000506872 718 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL12P48061 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL12P48061 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.92□□□□□ -1.78
CXCL12P48061 MTND1P6-201ENST00000523621 946 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 OR4A12P-201ENST00000530847 918 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.92□□□□□ -1.78
CXCL12P48061 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.92□□□□□ -1.78
CXCL12P48061 AP001542.1-201ENST00000591314 200 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.92□□□□□ -1.78
CXCL12P48061 AC233280.2-201ENST00000603917 1070 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.92□□□□□ -1.78
CXCL12P48061 AC131238.1-201ENST00000617135 328 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 LINC00901.1-201ENST00000617252 152 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 AC073530.2-201ENST00000623987 261 ntBASIC3.92□□□□□ -1.78
CXCL12P48061 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.92□□□□□ -1.78
CXCL12P48061 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.92□□□□□ -1.78
CXCL12P48061 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CXCL12P48061 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms