Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RPL7P48-201ENST00000461513 746 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AC092324.1-201ENST00000468671 324 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AC109327.1-201ENST00000471666 403 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 RPL12P20-201ENST00000475538 479 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 RPL7AP6-201ENST00000477943 801 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AC004069.2-201ENST00000505438 1114 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.36□□□□□ -1.71
CASQ1P31415 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.36□□□□□ -1.71
CASQ1P31415 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.36□□□□□ -1.71
CASQ1P31415 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.36□□□□□ -1.71
CASQ1P31415 UBE2FP2-201ENST00000566646 462 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AC027281.1-201ENST00000574178 758 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 MIR3176-201ENST00000582210 90 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.36□□□□□ -1.71
CASQ1P31415 AL451044.1-201ENST00000604867 238 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.36□□□□□ -1.71
CASQ1P31415 AC008121.2-201ENST00000614647 523 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.36□□□□□ -1.71
CASQ1P31415 AL445363.3-201ENST00000623080 671 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AC048347.1-201ENST00000624621 427 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 AC009950.2-201ENST00000636548 183 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CASQ1P31415 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CASQ1P31415 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CASQ1P31415 AC006504.1-201ENST00000562493 3666 ntBASIC4.36□□□□□ -1.71
CASQ1P31415 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CASQ1P31415 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.36□□□□□ -1.71
CASQ1P31415 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
CASQ1P31415 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CASQ1P31415 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CASQ1P31415 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CASQ1P31415 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CASQ1P31415 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CASQ1P31415 RPS26P13-201ENST00000419030 330 ntBASIC4.35□□□□□ -1.71
CASQ1P31415 UQCRBP1-201ENST00000421129 336 ntBASIC4.35□□□□□ -1.71
CASQ1P31415 FTH1P16-201ENST00000435241 552 ntBASIC4.35□□□□□ -1.71
CASQ1P31415 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CASQ1P31415 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.35□□□□□ -1.71
CASQ1P31415 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.35□□□□□ -1.71
CASQ1P31415 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.35□□□□□ -1.71
CASQ1P31415 AC147055.3-201ENST00000510547 851 ntBASIC4.35□□□□□ -1.71
CASQ1P31415 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.35□□□□□ -1.71
CASQ1P31415 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.35□□□□□ -1.71
CASQ1P31415 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.35□□□□□ -1.71
CASQ1P31415 MTND1P6-201ENST00000523621 946 ntBASIC4.35□□□□□ -1.71
CASQ1P31415 OR5D17P-201ENST00000531492 978 ntBASIC4.35□□□□□ -1.71
CASQ1P31415 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.35□□□□□ -1.71
CASQ1P31415 MIR4737-201ENST00000583979 81 ntBASIC4.35□□□□□ -1.71
CASQ1P31415 AC113403.1-201ENST00000604910 193 ntBASIC4.35□□□□□ -1.71
CASQ1P31415 AC112503.1-201ENST00000608436 391 ntBASIC4.35□□□□□ -1.71
CASQ1P31415 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CASQ1P31415 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CASQ1P31415 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CASQ1P31415 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CASQ1P31415 SNORA31-201ENST00000362607 130 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 SNORD35B-201ENST00000363660 87 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 SNORD113.2-201ENST00000364166 89 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 RNA5SP189-201ENST00000364920 115 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 RNU6-356P-201ENST00000384140 107 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 RN7SKP235-201ENST00000410662 305 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.34□□□□□ -1.71
CASQ1P31415 AC127526.1-201ENST00000417526 366 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 BTF3P9-201ENST00000418784 283 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.34□□□□□ -1.71
CASQ1P31415 MFSD13B-201ENST00000420133 1290 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 AC008065.1-201ENST00000428525 348 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 ARF4P2-201ENST00000430209 526 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.34□□□□□ -1.71
CASQ1P31415 AC105402.2-201ENST00000438503 358 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.34□□□□□ -1.71
CASQ1P31415 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 MTCO3P20-201ENST00000454926 688 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.34□□□□□ -1.71
CASQ1P31415 RN7SL738P-201ENST00000470264 297 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.34□□□□□ -1.71
CASQ1P31415 RN7SL271P-201ENST00000487601 295 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 AC078918.1-201ENST00000498515 228 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 AC093824.1-201ENST00000508796 343 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CASQ1P31415 SEC11B-201ENST00000518383 499 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 HIGD1AP10-201ENST00000527837 282 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.34□□□□□ -1.71
CASQ1P31415 AC022968.1-201ENST00000567372 442 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 AC099489.2-201ENST00000574976 260 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.34□□□□□ -1.71
CASQ1P31415 MIR3186-201ENST00000577404 85 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 MIR4489-201ENST00000578869 62 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 MIR5047-201ENST00000579212 100 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 AC011445.2-201ENST00000599274 173 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.34□□□□□ -1.71
CASQ1P31415 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.34□□□□□ -1.71
CASQ1P31415 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CASQ1P31415 AC092628.2-201ENST00000622492 339 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 AC007342.8-201ENST00000623278 678 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CASQ1P31415 AC140479.6-201ENST00000633535 357 ntBASIC4.34□□□□□ -1.71
CASQ1P31415 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CASQ1P31415 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.34□□□□□ -1.71
CASQ1P31415 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CASQ1P31415 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms