Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.55□□□□□ -1.52
SMARCA1P28370 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.55□□□□□ -1.52
SMARCA1P28370 MRPL48P1-201ENST00000445390 636 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.55□□□□□ -1.52
SMARCA1P28370 AC011979.1-201ENST00000472300 483 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 TRBV8-2-201ENST00000475637 270 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 AC073522.1-201ENST00000483312 377 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.55□□□□□ -1.52
SMARCA1P28370 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.55□□□□□ -1.52
SMARCA1P28370 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.55□□□□□ -1.52
SMARCA1P28370 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.55□□□□□ -1.52
SMARCA1P28370 RN7SKP276-201ENST00000516242 268 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.55□□□□□ -1.52
SMARCA1P28370 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.55□□□□□ -1.52
SMARCA1P28370 AL356057.1-201ENST00000533798 831 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.55□□□□□ -1.52
SMARCA1P28370 AP001880.2-201ENST00000538233 448 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMARCA1P28370 AC092747.2-201ENST00000545069 983 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.55□□□□□ -1.52
SMARCA1P28370 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.55□□□□□ -1.52
SMARCA1P28370 AC133555.2-201ENST00000550213 292 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 MIR4472-2-201ENST00000582069 67 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.55□□□□□ -1.52
SMARCA1P28370 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.55□□□□□ -1.52
SMARCA1P28370 PSMA6P4-201ENST00000603247 718 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 ELOCP34-201ENST00000604436 327 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 Mico1.1-201ENST00000611698 204 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMARCA1P28370 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.55□□□□□ -1.52
SMARCA1P28370 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
SMARCA1P28370 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMARCA1P28370 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMARCA1P28370 THAP12P5-201ENST00000405864 2275 ntBASIC5.55□□□□□ -1.52
SMARCA1P28370 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMARCA1P28370 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SMARCA1P28370 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMARCA1P28370 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMARCA1P28370 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.55□□□□□ -1.52
SMARCA1P28370 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.55□□□□□ -1.52
SMARCA1P28370 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMARCA1P28370 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.55□□□□□ -1.52
SMARCA1P28370 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.55□□□□□ -1.52
SMARCA1P28370 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMARCA1P28370 AC112198.2-201ENST00000426589 6996 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
SMARCA1P28370 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC103591.2-201ENST00000265259 766 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SMARCA1P28370 AC008549.2-201ENST00000333482 706 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 RNU6-707P-201ENST00000364647 95 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 RNVU1-6-201ENST00000364688 164 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 OR1L1-202ENST00000373686 1083 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SMARCA1P28370 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SMARCA1P28370 AC093719.1-202ENST00000392735 373 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 RNU2-50P-201ENST00000410494 143 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 RNU6-77P-201ENST00000410554 91 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.54□□□□□ -1.52
SMARCA1P28370 RPL6P29-201ENST00000414863 865 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC090960.1-201ENST00000421072 306 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC099336.2-201ENST00000422457 254 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 EIF4HP2-201ENST00000424380 563 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 RPL21P43-201ENST00000425440 472 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
SMARCA1P28370 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.54□□□□□ -1.52
SMARCA1P28370 AL365396.1-201ENST00000430854 671 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.54□□□□□ -1.52
SMARCA1P28370 TMX2P1-201ENST00000436507 708 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.54□□□□□ -1.52
SMARCA1P28370 AL450263.2-201ENST00000439400 589 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC104978.1-201ENST00000449387 391 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AL513533.1-201ENST00000453728 415 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC099560.2-201ENST00000457554 255 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 RNA5SP249-201ENST00000516127 99 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.54□□□□□ -1.52
SMARCA1P28370 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.54□□□□□ -1.52
SMARCA1P28370 IGJP1-201ENST00000522682 475 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.54□□□□□ -1.52
SMARCA1P28370 AC125611.1-201ENST00000549563 229 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 NBEAP1-201ENST00000554452 979 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 CYCSP40-201ENST00000575927 294 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 PIGPP4-201ENST00000584447 307 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.54□□□□□ -1.52
SMARCA1P28370 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.54□□□□□ -1.52
SMARCA1P28370 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.54□□□□□ -1.52
SMARCA1P28370 AC068790.7-201ENST00000602347 528 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC080013.3-201ENST00000606839 578 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC245008.1-201ENST00000608123 476 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AP005137.2-201ENST00000609238 400 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC105227.2-201ENST00000615075 605 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC009318.3-201ENST00000616916 503 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC015914.2-201ENST00000618167 288 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC012414.7-202ENST00000622705 1090 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AL157770.1-201ENST00000623049 439 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC007490.1-201ENST00000624321 703 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 AC087821.2-201ENST00000637086 450 ntBASIC5.54□□□□□ -1.52
SMARCA1P28370 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.54□□□□□ -1.52
SMARCA1P28370 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMARCA1P28370 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms