Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.18□□□□□ -1.74
XRCC1P18887 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.18□□□□□ -1.74
XRCC1P18887 HMGB3P22-202ENST00000451823 572 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AC099560.2-201ENST00000457554 255 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 RPL23AP2-201ENST00000471227 466 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.18□□□□□ -1.74
XRCC1P18887 PRELID3BP7-201ENST00000503606 469 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.18□□□□□ -1.74
XRCC1P18887 AC017037.1-201ENST00000508460 471 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.18□□□□□ -1.74
XRCC1P18887 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
XRCC1P18887 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.18□□□□□ -1.74
XRCC1P18887 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.18□□□□□ -1.74
XRCC1P18887 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.18□□□□□ -1.74
XRCC1P18887 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.18□□□□□ -1.74
XRCC1P18887 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
XRCC1P18887 NOP56P3-201ENST00000549457 385 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 TVP23BP1-201ENST00000557500 617 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AC027176.2-201ENST00000559166 746 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AC068714.1-201ENST00000559623 800 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.18□□□□□ -1.74
XRCC1P18887 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.18□□□□□ -1.74
XRCC1P18887 AC040174.2-201ENST00000602701 465 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AC068790.5-201ENST00000602741 355 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AL161729.3-201ENST00000603533 673 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.18□□□□□ -1.74
XRCC1P18887 AL355802.4-201ENST00000607635 548 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AL391834.1-201ENST00000609609 560 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 RMST_9.1-201ENST00000619945 193 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
XRCC1P18887 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.18□□□□□ -1.74
XRCC1P18887 MIR492-201ENST00000638676 116 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
XRCC1P18887 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
XRCC1P18887 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.18□□□□□ -1.74
XRCC1P18887 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
XRCC1P18887 HSPD1P11-201ENST00000508643 1702 ntBASIC4.18□□□□□ -1.74
XRCC1P18887 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
XRCC1P18887 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
XRCC1P18887 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
XRCC1P18887 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
XRCC1P18887 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
XRCC1P18887 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
XRCC1P18887 PHKBP1-201ENST00000450951 1951 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 RN7SKP227-201ENST00000364445 330 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 SNORD66.1-201ENST00000391230 76 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 AL583835.1-201ENST00000399570 407 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
XRCC1P18887 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.17□□□□□ -1.74
XRCC1P18887 RNA5SP36-201ENST00000410197 133 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 AC105402.1-201ENST00000413336 545 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.17□□□□□ -1.74
XRCC1P18887 RPS27AP12-201ENST00000429552 465 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 BTF3P10-201ENST00000433415 495 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 AL353597.2-202ENST00000434901 373 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.17□□□□□ -1.74
XRCC1P18887 RPL23AP89-201ENST00000439324 255 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.17□□□□□ -1.74
XRCC1P18887 HMGB1P26-201ENST00000452520 628 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 NUTF2P7-201ENST00000453086 375 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 CABYRP1-201ENST00000465493 1045 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 RPL7P22-201ENST00000466005 733 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 RPL7P19-201ENST00000469948 618 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 RN7SL585P-201ENST00000470538 280 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 AC108145.1-201ENST00000503770 153 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 RN7SKP21-201ENST00000516503 220 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 AC090281.1-201ENST00000523019 276 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.17□□□□□ -1.74
XRCC1P18887 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.17□□□□□ -1.74
XRCC1P18887 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.17□□□□□ -1.74
XRCC1P18887 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.17□□□□□ -1.74
XRCC1P18887 AC025016.1-201ENST00000616746 682 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 AC007546.1-201ENST00000619452 559 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 AC138907.10-201ENST00000623708 983 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 AC008785.1-201ENST00000624475 456 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
XRCC1P18887 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
XRCC1P18887 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.17□□□□□ -1.74
XRCC1P18887 AL451142.2-201ENST00000429076 2090 ntBASIC4.17□□□□□ -1.74
XRCC1P18887 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.17□□□□□ -1.74
XRCC1P18887 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
XRCC1P18887 LARP1BP1-201ENST00000506036 1359 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 NOL8P1-201ENST00000508336 3529 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
XRCC1P18887 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
XRCC1P18887 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
XRCC1P18887 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
XRCC1P18887 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.16□□□□□ -1.74
XRCC1P18887 AC011155.1-201ENST00000316512 456 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
XRCC1P18887 AL121657.1-201ENST00000327215 531 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
XRCC1P18887 RNA5SP502-201ENST00000362694 119 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
XRCC1P18887 RNU6-185P-201ENST00000384421 107 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 RNU6-244P-201ENST00000391028 104 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AC093719.1-202ENST00000392735 373 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms