Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGA1P17096 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGA1P17096 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGA1P17096 LINC02471-203ENST00000641941 4752 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
HMGA1P17096 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGA1P17096 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGA1P17096 RNA5SP387-201ENST00000364226 106 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGA1P17096 HLFP1-201ENST00000402375 499 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGA1P17096 HIGD1AP12-201ENST00000427832 281 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 RPL21P23-201ENST00000446654 460 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 PRDX3P3-201ENST00000447765 522 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGA1P17096 AC073387.1-201ENST00000453261 709 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 SNORD105B-201ENST00000458770 79 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 AC006511.1-201ENST00000470614 315 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 RPL7P49-201ENST00000471402 708 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 TRBV12-2-201ENST00000489763 344 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGA1P17096 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGA1P17096 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGA1P17096 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGA1P17096 AC233280.2-201ENST00000603917 1070 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 AC012468.1-201ENST00000604888 430 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGA1P17096 AP000553.6-201ENST00000641242 118 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 OR5AC4P-202ENST00000642086 985 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGA1P17096 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGA1P17096 AC019072.1-201ENST00000604535 1551 ntBASIC3.85□□□□□ -1.79
HMGA1P17096 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.79
HMGA1P17096 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMGA1P17096 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.84□□□□□ -1.79
HMGA1P17096 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMGA1P17096 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HMGA1P17096 MIR448-201ENST00000362131 111 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 CBX1P3-201ENST00000413296 527 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 AC245052.5-201ENST00000416320 649 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 AL691447.1-201ENST00000419456 387 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.84□□□□□ -1.79
HMGA1P17096 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.84□□□□□ -1.79
HMGA1P17096 AC098824.1-201ENST00000453565 980 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 AC010469.1-201ENST00000463864 576 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGA1P17096 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.84□□□□□ -1.79
HMGA1P17096 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGA1P17096 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGA1P17096 AL133247.2-201ENST00000603236 482 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 AC010591.1-201ENST00000603941 649 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 AL357559.1-201ENST00000622228 274 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 AC243312.2-201ENST00000623340 601 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 AC244258.1-201ENST00000637553 1071 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 LINC01109-201ENST00000603837 3081 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 MAPK10-253ENST00000641010 4072 ntBASIC3.84□□□□□ -1.79
HMGA1P17096 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGA1P17096 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGA1P17096 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.84□□□□□ -1.8
HMGA1P17096 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
HMGA1P17096 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HMGA1P17096 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.84□□□□□ -1.8
HMGA1P17096 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.84□□□□□ -1.8
HMGA1P17096 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC3.84□□□□□ -1.8
HMGA1P17096 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.84□□□□□ -1.8
HMGA1P17096 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGA1P17096 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGA1P17096 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
HMGA1P17096 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
HMGA1P17096 AC007685.1-201ENST00000329806 452 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGA1P17096 MIR218-2-201ENST00000385006 110 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 AL121834.1-202ENST00000404494 277 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 RNU2-65P-201ENST00000410162 185 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 AP000907.1-201ENST00000428428 510 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 AL159987.2-201ENST00000432754 307 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGA1P17096 PRSS3P4-201ENST00000453323 162 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGA1P17096 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
HMGA1P17096 AP003392.5-201ENST00000607857 415 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 AC084757.4-201ENST00000616350 526 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 AC074276.2-201ENST00000619891 348 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGA1P17096 AL392088.2-201ENST00000637607 285 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 AC233968.1-201ENST00000611212 1300 ntBASIC3.83□□□□□ -1.8
HMGA1P17096 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGA1P17096 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HMGA1P17096 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGA1P17096 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGA1P17096 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGA1P17096 AL049781.1-201ENST00000623195 3585 ntBASIC3.82□□□□□ -1.8
HMGA1P17096 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
HMGA1P17096 AC139426.3-201ENST00000605648 2059 ntBASIC3.82□□□□□ -1.8
HMGA1P17096 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGA1P17096 SNORD74.4-201ENST00000364129 80 ntBASIC3.82□□□□□ -1.8
HMGA1P17096 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
HMGA1P17096 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms