Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC004656.1-201ENST00000568479 4951 ntBASIC3.73□□□□□ -1.81
VCANP13611 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.73□□□□□ -1.81
VCANP13611 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.73□□□□□ -1.81
VCANP13611 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 AC233981.1-201ENST00000423224 461 ntBASIC3.73□□□□□ -1.81
VCANP13611 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.73□□□□□ -1.81
VCANP13611 TRBV12-1-201ENST00000479785 344 ntBASIC3.73□□□□□ -1.81
VCANP13611 RN7SKP132-201ENST00000516001 208 ntBASIC3.73□□□□□ -1.81
VCANP13611 RNA5SP230-201ENST00000517039 122 ntBASIC3.73□□□□□ -1.81
VCANP13611 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.73□□□□□ -1.81
VCANP13611 AC079171.1-201ENST00000568788 914 ntBASIC3.73□□□□□ -1.81
VCANP13611 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.73□□□□□ -1.81
VCANP13611 AC073657.2-201ENST00000605661 303 ntBASIC3.73□□□□□ -1.81
VCANP13611 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 AL161912.2-201ENST00000565707 3007 ntBASIC3.73□□□□□ -1.81
VCANP13611 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC3.73□□□□□ -1.81
VCANP13611 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.73□□□□□ -1.81
VCANP13611 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VCANP13611 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.72□□□□□ -1.81
VCANP13611 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.72□□□□□ -1.81
VCANP13611 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.72□□□□□ -1.81
VCANP13611 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.72□□□□□ -1.81
VCANP13611 OR1AA1P-201ENST00000419597 916 ntBASIC3.72□□□□□ -1.81
VCANP13611 AC105272.1-201ENST00000438604 198 ntBASIC3.72□□□□□ -1.81
VCANP13611 snoU13.23-201ENST00000458863 104 ntBASIC3.72□□□□□ -1.81
VCANP13611 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.72□□□□□ -1.81
VCANP13611 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.72□□□□□ -1.81
VCANP13611 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 AP003485.2-201ENST00000623636 610 ntBASIC3.72□□□□□ -1.81
VCANP13611 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
VCANP13611 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VCANP13611 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
VCANP13611 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VCANP13611 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 AL049781.1-201ENST00000623195 3585 ntBASIC3.72□□□□□ -1.81
VCANP13611 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.72□□□□□ -1.81
VCANP13611 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
VCANP13611 AL138885.1-201ENST00000405921 675 ntBASIC3.72□□□□□ -1.81
VCANP13611 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.72□□□□□ -1.81
VCANP13611 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.72□□□□□ -1.81
VCANP13611 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.72□□□□□ -1.81
VCANP13611 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC3.72□□□□□ -1.81
VCANP13611 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.72□□□□□ -1.81
VCANP13611 MIR4425-201ENST00000580572 84 ntBASIC3.72□□□□□ -1.81
VCANP13611 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.72□□□□□ -1.81
VCANP13611 AL390816.3-201ENST00000604527 1066 ntBASIC3.72□□□□□ -1.81
VCANP13611 AC139713.2-210ENST00000641741 992 ntBASIC3.72□□□□□ -1.81
VCANP13611 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
VCANP13611 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.72□□□□□ -1.81
VCANP13611 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.72□□□□□ -1.81
VCANP13611 AP003122.5-201ENST00000527668 3766 ntBASIC3.72□□□□□ -1.81
VCANP13611 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 IFNA11P-201ENST00000446352 526 ntBASIC3.72□□□□□ -1.81
VCANP13611 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
VCANP13611 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VCANP13611 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.72□□□□□ -1.81
VCANP13611 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
VCANP13611 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
VCANP13611 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.71□□□□□ -1.81
VCANP13611 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.71□□□□□ -1.81
VCANP13611 RPS3AP43-201ENST00000479743 781 ntBASIC3.71□□□□□ -1.81
VCANP13611 AC006517.1-201ENST00000480485 328 ntBASIC3.71□□□□□ -1.81
VCANP13611 AC090151.1-201ENST00000520784 730 ntBASIC3.71□□□□□ -1.81
VCANP13611 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
VCANP13611 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
VCANP13611 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VCANP13611 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.71□□□□□ -1.82
VCANP13611 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VCANP13611 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.71□□□□□ -1.82
VCANP13611 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
VCANP13611 MAPK10-372ENST00000641954 3413 ntBASIC3.71□□□□□ -1.82
VCANP13611 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VCANP13611 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.71□□□□□ -1.82
VCANP13611 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.71□□□□□ -1.82
VCANP13611 AC000041.1-201ENST00000439655 175 ntBASIC3.71□□□□□ -1.82
VCANP13611 snoU13.26-201ENST00000459452 105 ntBASIC3.71□□□□□ -1.82
VCANP13611 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VCANP13611 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VCANP13611 COX6CP4-201ENST00000605798 228 ntBASIC3.71□□□□□ -1.82
VCANP13611 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms