Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 ATG4AP1-201ENST00000416893 538 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGB1P09429 HSFY1P1-201ENST00000423928 1178 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 OSTCP5-201ENST00000425293 453 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGB1P09429 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGB1P09429 ELOCP18-201ENST00000434209 337 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 RPL21P112-201ENST00000434403 463 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGB1P09429 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGB1P09429 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGB1P09429 RN7SL30P-201ENST00000488416 306 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 AC093767.1-201ENST00000504523 156 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGB1P09429 AC023141.12-201ENST00000512399 199 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGB1P09429 RN7SKP260-201ENST00000516907 149 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGB1P09429 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGB1P09429 AC008127.2-201ENST00000549925 1075 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGB1P09429 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGB1P09429 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.01□□□□□ -1.45
HMGB1P09429 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
HMGB1P09429 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.01□□□□□ -1.45
HMGB1P09429 AC069431.2-201ENST00000604149 1099 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 AC024060.1-201ENST00000607052 494 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 AL159169.3-201ENST00000608871 561 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.01□□□□□ -1.45
HMGB1P09429 PART1_2.1-201ENST00000612397 250 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 AC123767.1-202ENST00000620407 817 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 AC009318.4-201ENST00000620496 486 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 AC103798.2-201ENST00000624292 632 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 PABPC1P6-201ENST00000445594 1829 ntBASIC6.01□□□□□ -1.45
HMGB1P09429 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HMGB1P09429 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HMGB1P09429 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HMGB1P09429 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HMGB1P09429 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
HMGB1P09429 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
HMGB1P09429 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGB1P09429 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HMGB1P09429 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGB1P09429 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGB1P09429 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC6□□□□□ -1.45
HMGB1P09429 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6□□□□□ -1.45
HMGB1P09429 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGB1P09429 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6□□□□□ -1.45
HMGB1P09429 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HMGB1P09429 AL138880.1-201ENST00000405824 642 ntBASIC6□□□□□ -1.45
HMGB1P09429 EI24P1-201ENST00000416584 867 ntBASIC6□□□□□ -1.45
HMGB1P09429 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6□□□□□ -1.45
HMGB1P09429 RPL7P57-201ENST00000423238 740 ntBASIC6□□□□□ -1.45
HMGB1P09429 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6□□□□□ -1.45
HMGB1P09429 RPS29P9-201ENST00000440360 171 ntBASIC6□□□□□ -1.45
HMGB1P09429 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6□□□□□ -1.45
HMGB1P09429 AL354714.3-201ENST00000447284 493 ntBASIC6□□□□□ -1.45
HMGB1P09429 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6□□□□□ -1.45
HMGB1P09429 AC092451.1-201ENST00000480211 153 ntBASIC6□□□□□ -1.45
HMGB1P09429 UBA52P7-201ENST00000486088 380 ntBASIC6□□□□□ -1.45
HMGB1P09429 AC092045.1-201ENST00000495716 1231 ntBASIC6□□□□□ -1.45
HMGB1P09429 AC072052.1-201ENST00000496556 306 ntBASIC6□□□□□ -1.45
HMGB1P09429 AC108078.3-201ENST00000502633 489 ntBASIC6□□□□□ -1.45
HMGB1P09429 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6□□□□□ -1.45
HMGB1P09429 AC021451.1-201ENST00000523498 1129 ntBASIC6□□□□□ -1.45
HMGB1P09429 MTCYBP41-201ENST00000528913 1123 ntBASIC6□□□□□ -1.45
HMGB1P09429 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6□□□□□ -1.45
HMGB1P09429 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6□□□□□ -1.45
HMGB1P09429 GTF2IP8-201ENST00000560687 584 ntBASIC6□□□□□ -1.45
HMGB1P09429 AC011840.5-201ENST00000582125 771 ntBASIC6□□□□□ -1.45
HMGB1P09429 AL355812.1-201ENST00000603215 216 ntBASIC6□□□□□ -1.45
HMGB1P09429 UOX-205ENST00000640983 544 ntTSL 4 BASIC6□□□□□ -1.45
HMGB1P09429 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGB1P09429 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6□□□□□ -1.45
HMGB1P09429 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGB1P09429 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC6□□□□□ -1.45
HMGB1P09429 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB1P09429 NOL8P1-201ENST00000508336 3529 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB1P09429 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HMGB1P09429 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB1P09429 RNU6-989P-201ENST00000362756 107 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HMGB1P09429 MIR122-201ENST00000385044 85 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB1P09429 FNDC3CP-201ENST00000420795 1155 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB1P09429 CNOT7P1-201ENST00000429006 852 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 SKP1P3-201ENST00000429280 487 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB1P09429 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB1P09429 PPIAP20-201ENST00000449839 135 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGB1P09429 RPL9P32-201ENST00000464118 620 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 PABPC1P3-201ENST00000469174 459 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 OR4G11P-201ENST00000492842 939 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 AC020593.1-201ENST00000507399 299 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 AP004371.1-201ENST00000525240 214 ntBASIC5.99□□□□□ -1.45
HMGB1P09429 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms