Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 PCAT14-202ENST00000627127 3935 ntBASIC4.93□□□□□ -1.62
MMP3P08254 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MMP3P08254 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
MMP3P08254 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.93□□□□□ -1.62
MMP3P08254 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.93□□□□□ -1.62
MMP3P08254 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.93□□□□□ -1.62
MMP3P08254 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
MMP3P08254 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
MMP3P08254 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MMP3P08254 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
MMP3P08254 LARP1BP1-201ENST00000506036 1359 ntBASIC4.92□□□□□ -1.62
MMP3P08254 SMG1P4-204ENST00000523028 4131 ntBASIC4.92□□□□□ -1.62
MMP3P08254 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MMP3P08254 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.92□□□□□ -1.62
MMP3P08254 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MMP3P08254 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
MMP3P08254 RNA5SP27-201ENST00000363839 119 ntBASIC4.92□□□□□ -1.62
MMP3P08254 RNU6-452P-201ENST00000384406 107 ntBASIC4.92□□□□□ -1.62
MMP3P08254 MIR137-201ENST00000385223 102 ntBASIC4.92□□□□□ -1.62
MMP3P08254 AL161909.1-201ENST00000397390 712 ntBASIC4.92□□□□□ -1.62
MMP3P08254 AC025750.1-201ENST00000399891 379 ntBASIC4.92□□□□□ -1.62
MMP3P08254 RPL7P27-201ENST00000403775 720 ntBASIC4.92□□□□□ -1.62
MMP3P08254 RPL5P19-201ENST00000404228 893 ntBASIC4.92□□□□□ -1.62
MMP3P08254 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.92□□□□□ -1.62
MMP3P08254 RN7SKP97-201ENST00000410966 333 ntBASIC4.92□□□□□ -1.62
MMP3P08254 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.92□□□□□ -1.62
MMP3P08254 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MMP3P08254 XKRYP1-201ENST00000423438 492 ntBASIC4.92□□□□□ -1.62
MMP3P08254 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.92□□□□□ -1.62
MMP3P08254 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.92□□□□□ -1.62
MMP3P08254 AL158073.1-201ENST00000426848 1104 ntBASIC4.92□□□□□ -1.62
MMP3P08254 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
MMP3P08254 CETN4P-201ENST00000432407 469 ntBASIC4.92□□□□□ -1.62
MMP3P08254 XKRYP2-201ENST00000432915 492 ntBASIC4.92□□□□□ -1.62
MMP3P08254 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.92□□□□□ -1.62
MMP3P08254 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.92□□□□□ -1.62
MMP3P08254 CACYBPP1-201ENST00000438592 684 ntBASIC4.92□□□□□ -1.62
MMP3P08254 AC114495.1-201ENST00000441274 436 ntBASIC4.92□□□□□ -1.62
MMP3P08254 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
MMP3P08254 AC096992.1-201ENST00000459808 709 ntBASIC4.92□□□□□ -1.62
MMP3P08254 RN7SL817P-201ENST00000480777 288 ntBASIC4.92□□□□□ -1.62
MMP3P08254 RPL35P6-201ENST00000490024 372 ntBASIC4.92□□□□□ -1.62
MMP3P08254 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.92□□□□□ -1.62
MMP3P08254 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.92□□□□□ -1.62
MMP3P08254 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.92□□□□□ -1.62
MMP3P08254 RNU6-311P-201ENST00000516224 102 ntBASIC4.92□□□□□ -1.62
MMP3P08254 MTND2P38-201ENST00000522536 667 ntBASIC4.92□□□□□ -1.62
MMP3P08254 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.92□□□□□ -1.62
MMP3P08254 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.92□□□□□ -1.62
MMP3P08254 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.92□□□□□ -1.62
MMP3P08254 AC087897.1-201ENST00000550134 156 ntBASIC4.92□□□□□ -1.62
MMP3P08254 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
MMP3P08254 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.92□□□□□ -1.62
MMP3P08254 AL109741.3-201ENST00000561748 592 ntBASIC4.92□□□□□ -1.62
MMP3P08254 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.92□□□□□ -1.62
MMP3P08254 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.92□□□□□ -1.62
MMP3P08254 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.92□□□□□ -1.62
MMP3P08254 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MMP3P08254 AC022022.2-201ENST00000602989 360 ntBASIC4.92□□□□□ -1.62
MMP3P08254 AC090948.2-201ENST00000607363 564 ntBASIC4.92□□□□□ -1.62
MMP3P08254 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.92□□□□□ -1.62
MMP3P08254 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.92□□□□□ -1.62
MMP3P08254 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.92□□□□□ -1.62
MMP3P08254 AC017104.5-201ENST00000637647 639 ntBASIC4.92□□□□□ -1.62
MMP3P08254 AC119674.1-212ENST00000641155 993 ntBASIC4.92□□□□□ -1.62
MMP3P08254 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
MMP3P08254 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
MMP3P08254 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.92□□□□□ -1.62
MMP3P08254 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
MMP3P08254 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
MMP3P08254 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.92□□□□□ -1.62
MMP3P08254 AL355578.1-201ENST00000607405 1328 ntBASIC4.92□□□□□ -1.62
MMP3P08254 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MMP3P08254 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
MMP3P08254 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
MMP3P08254 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
MMP3P08254 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
MMP3P08254 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
MMP3P08254 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
MMP3P08254 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
MMP3P08254 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
MMP3P08254 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
MMP3P08254 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
MMP3P08254 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
MMP3P08254 RNU1-83P-201ENST00000363426 164 ntBASIC4.91□□□□□ -1.62
MMP3P08254 MIR134-201ENST00000385258 73 ntBASIC4.91□□□□□ -1.62
MMP3P08254 SNORD65C-201ENST00000390962 71 ntBASIC4.91□□□□□ -1.62
MMP3P08254 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.91□□□□□ -1.62
MMP3P08254 AL583835.1-201ENST00000399570 407 ntBASIC4.91□□□□□ -1.62
MMP3P08254 AL592291.1-201ENST00000403830 352 ntBASIC4.91□□□□□ -1.62
MMP3P08254 HMGB3P31-201ENST00000413333 595 ntBASIC4.91□□□□□ -1.62
MMP3P08254 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.91□□□□□ -1.62
MMP3P08254 Z74021.1-201ENST00000423610 407 ntBASIC4.91□□□□□ -1.62
MMP3P08254 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.91□□□□□ -1.62
MMP3P08254 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.91□□□□□ -1.62
MMP3P08254 RPL34P6-201ENST00000432390 345 ntBASIC4.91□□□□□ -1.62
MMP3P08254 GTF2IP3-201ENST00000433887 494 ntBASIC4.91□□□□□ -1.62
MMP3P08254 USP9YP24-201ENST00000434374 697 ntBASIC4.91□□□□□ -1.62
MMP3P08254 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.91□□□□□ -1.62
MMP3P08254 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms