Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 HMGN2P8-201ENST00000391458 268 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 TCEA1P4-201ENST00000415066 844 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 AL591419.1-201ENST00000427423 339 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 RPL7P2-201ENST00000427639 268 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 IFNNP1-201ENST00000429219 553 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 AL357520.1-201ENST00000441557 453 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 NPM1P41-201ENST00000512920 831 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 RNA5SP143-201ENST00000516936 115 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 MIR5685-201ENST00000579080 79 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 SS18L2P2-201ENST00000583960 235 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 AC068790.5-201ENST00000602741 355 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 AC107027.3-201ENST00000565095 3473 ntBASIC3.82□□□□□ -1.8
HLA-DQB2P05538 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DQB2P05538 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 NCAPGP1-201ENST00000505112 1814 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AC024560.2-201ENST00000507981 1497 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AL356317.1-201ENST00000396110 1436 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 OR4A15-201ENST00000314706 1035 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 RNU1-89P-201ENST00000384592 164 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 RNU6-1263P-201ENST00000384601 106 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 SNORA57.1-201ENST00000391227 145 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 ATP5F1P4-201ENST00000397288 746 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 RN7SKP156-201ENST00000410308 342 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 RPS12P5-201ENST00000423449 371 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 IPMKP1-201ENST00000425988 855 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AL390879.2-203ENST00000426943 1121 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 HIGD1AP12-201ENST00000427832 281 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 HSPE1P22-201ENST00000456856 327 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AC007991.1-201ENST00000522680 631 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AC090912.3-201ENST00000609775 533 ntBASIC3.81□□□□□ -1.8
HLA-DQB2P05538 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQB2P05538 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 AP004289.2-201ENST00000444413 1457 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 RNA5SP322-201ENST00000363617 119 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 MIR708-201ENST00000390708 88 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 RNA5SP424-201ENST00000390988 115 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 RPL32P23-201ENST00000397237 405 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 AC136624.1-201ENST00000400791 413 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 ZNF603P-201ENST00000405613 487 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 HSPE1P8-201ENST00000406997 288 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 MTND2P15-201ENST00000418575 892 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 SETD6P1-201ENST00000444575 317 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 RPS20P21-201ENST00000466859 343 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DQB2P05538 RN7SKP141-201ENST00000516167 338 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 AL121839.1-201ENST00000556233 1185 ntBASIC3.8□□□□□ -1.8
HLA-DQB2P05538 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms