Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
MYCNP04198 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC9.25□□□□□ -0.93
MYCNP04198 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
MYCNP04198 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
MYCNP04198 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC9.24□□□□□ -0.93
MYCNP04198 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
MYCNP04198 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
MYCNP04198 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC9.24□□□□□ -0.93
MYCNP04198 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC9.24□□□□□ -0.93
MYCNP04198 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC9.24□□□□□ -0.93
MYCNP04198 OR9M1P-202ENST00000641564 3163 ntBASIC9.24□□□□□ -0.93
MYCNP04198 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 RPL9P7-201ENST00000330965 580 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.82-201ENST00000363000 102 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.92-201ENST00000363043 102 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.235-201ENST00000364412 102 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.275-201ENST00000364726 110 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.306-201ENST00000365015 102 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.308-201ENST00000365043 101 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.312-201ENST00000365089 102 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.322-201ENST00000365151 102 ntBASIC9.24□□□□□ -0.93
MYCNP04198 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
MYCNP04198 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC9.24□□□□□ -0.93
MYCNP04198 MIR595-201ENST00000384905 96 ntBASIC9.24□□□□□ -0.93
MYCNP04198 RN7SKP119-201ENST00000410753 273 ntBASIC9.24□□□□□ -0.93
MYCNP04198 DPPA2P2-201ENST00000418220 897 ntBASIC9.24□□□□□ -0.93
MYCNP04198 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC9.24□□□□□ -0.93
MYCNP04198 CEACAMP1-201ENST00000434624 1035 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Z97634.1-203ENST00000435229 471 ntBASIC9.24□□□□□ -0.93
MYCNP04198 CYCSP43-201ENST00000438233 310 ntBASIC9.24□□□□□ -0.93
MYCNP04198 AL513043.1-201ENST00000439124 535 ntBASIC9.24□□□□□ -0.93
MYCNP04198 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC9.24□□□□□ -0.93
MYCNP04198 NUTF2P7-201ENST00000453086 375 ntBASIC9.24□□□□□ -0.93
MYCNP04198 RPL10P6-201ENST00000457497 318 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.650-201ENST00000459002 102 ntBASIC9.24□□□□□ -0.93
MYCNP04198 RNU6-1037P-201ENST00000459571 107 ntBASIC9.24□□□□□ -0.93
MYCNP04198 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 AC080188.1-201ENST00000491923 567 ntBASIC9.24□□□□□ -0.93
MYCNP04198 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC9.24□□□□□ -0.93
MYCNP04198 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC9.24□□□□□ -0.93
MYCNP04198 RNY3P16-201ENST00000516338 101 ntBASIC9.24□□□□□ -0.93
MYCNP04198 RNA5SP459-201ENST00000516628 100 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.777-201ENST00000516982 102 ntBASIC9.24□□□□□ -0.93
MYCNP04198 IGLV1-41-201ENST00000519790 406 ntBASIC9.24□□□□□ -0.93
MYCNP04198 IGHVIII-82-201ENST00000522058 250 ntBASIC9.24□□□□□ -0.93
MYCNP04198 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC9.24□□□□□ -0.93
MYCNP04198 CASP1P1-201ENST00000526345 212 ntBASIC9.24□□□□□ -0.93
MYCNP04198 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.771-201ENST00000598668 102 ntBASIC9.24□□□□□ -0.93
MYCNP04198 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
MYCNP04198 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC9.24□□□□□ -0.93
MYCNP04198 Y_RNA.789-201ENST00000622480 102 ntBASIC9.24□□□□□ -0.93
MYCNP04198 AL450226.2-201ENST00000622913 439 ntBASIC9.24□□□□□ -0.93
MYCNP04198 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC9.24□□□□□ -0.93
MYCNP04198 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC9.24□□□□□ -0.93
MYCNP04198 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
MYCNP04198 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC9.24□□□□□ -0.93
MYCNP04198 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MYCNP04198 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
MYCNP04198 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
MYCNP04198 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC9.23□□□□□ -0.93
MYCNP04198 CDC27P2-201ENST00000425026 1922 ntBASIC9.23□□□□□ -0.93
MYCNP04198 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
MYCNP04198 TMEM75-201ENST00000624314 2165 ntBASIC9.23□□□□□ -0.93
MYCNP04198 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
MYCNP04198 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
MYCNP04198 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MYCNP04198 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MYCNP04198 CPNE4-210ENST00000512332 2230 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
MYCNP04198 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
MYCNP04198 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC9.23□□□□□ -0.93
MYCNP04198 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
MYCNP04198 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MYCNP04198 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC9.23□□□□□ -0.93
MYCNP04198 RN7SKP211-201ENST00000363328 315 ntBASIC9.23□□□□□ -0.93
MYCNP04198 Y_RNA.215-201ENST00000364204 112 ntBASIC9.23□□□□□ -0.93
MYCNP04198 SNORD78.2-201ENST00000391076 69 ntBASIC9.23□□□□□ -0.93
MYCNP04198 H2AFZP3-201ENST00000394213 387 ntBASIC9.23□□□□□ -0.93
MYCNP04198 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC9.23□□□□□ -0.93
MYCNP04198 RPL23AP65-201ENST00000475608 468 ntBASIC9.23□□□□□ -0.93
MYCNP04198 RN7SL338P-201ENST00000481467 293 ntBASIC9.23□□□□□ -0.93
MYCNP04198 RN7SL464P-201ENST00000492743 297 ntBASIC9.23□□□□□ -0.93
MYCNP04198 OR7H2P-201ENST00000513483 306 ntBASIC9.23□□□□□ -0.93
MYCNP04198 MIR2355-201ENST00000517199 87 ntBASIC9.23□□□□□ -0.93
MYCNP04198 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC9.23□□□□□ -0.93
MYCNP04198 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC9.23□□□□□ -0.93
MYCNP04198 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC9.23□□□□□ -0.93
MYCNP04198 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC9.23□□□□□ -0.93
MYCNP04198 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms