Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 RNU1-106P-201ENST00000384382 164 ntBASIC3.67□□□□□ -1.82
APOA1P02647 HSPE1P26-201ENST00000405341 275 ntBASIC3.67□□□□□ -1.82
APOA1P02647 RNA5SP113-201ENST00000410486 84 ntBASIC3.67□□□□□ -1.82
APOA1P02647 AC119751.6-201ENST00000416712 186 ntBASIC3.67□□□□□ -1.82
APOA1P02647 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.67□□□□□ -1.82
APOA1P02647 HMGB1P32-201ENST00000425971 565 ntBASIC3.67□□□□□ -1.82
APOA1P02647 AL160175.1-201ENST00000428124 247 ntBASIC3.67□□□□□ -1.82
APOA1P02647 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.67□□□□□ -1.82
APOA1P02647 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.67□□□□□ -1.82
APOA1P02647 RPL34P26-201ENST00000445636 354 ntBASIC3.67□□□□□ -1.82
APOA1P02647 NPM1P49-201ENST00000448027 714 ntBASIC3.67□□□□□ -1.82
APOA1P02647 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.67□□□□□ -1.82
APOA1P02647 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.67□□□□□ -1.82
APOA1P02647 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.67□□□□□ -1.82
APOA1P02647 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.67□□□□□ -1.82
APOA1P02647 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOA1P02647 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.67□□□□□ -1.82
APOA1P02647 HIGD1AP14-201ENST00000507617 282 ntBASIC3.67□□□□□ -1.82
APOA1P02647 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.67□□□□□ -1.82
APOA1P02647 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.67□□□□□ -1.82
APOA1P02647 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.67□□□□□ -1.82
APOA1P02647 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
APOA1P02647 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.67□□□□□ -1.82
APOA1P02647 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.67□□□□□ -1.82
APOA1P02647 CENPUP2-201ENST00000555897 1186 ntBASIC3.67□□□□□ -1.82
APOA1P02647 BGLT3-201ENST00000564523 994 ntBASIC3.67□□□□□ -1.82
APOA1P02647 AC007599.1-201ENST00000568688 1174 ntBASIC3.67□□□□□ -1.82
APOA1P02647 MIR4330-201ENST00000579077 105 ntBASIC3.67□□□□□ -1.82
APOA1P02647 AC022146.1-201ENST00000595307 847 ntBASIC3.67□□□□□ -1.82
APOA1P02647 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOA1P02647 AL512782.1-201ENST00000603093 364 ntBASIC3.67□□□□□ -1.82
APOA1P02647 AC079587.1-201ENST00000603846 277 ntBASIC3.67□□□□□ -1.82
APOA1P02647 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOA1P02647 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
APOA1P02647 U6.48-201ENST00000618523 106 ntBASIC3.67□□□□□ -1.82
APOA1P02647 MIR6853-201ENST00000619642 74 ntBASIC3.67□□□□□ -1.82
APOA1P02647 MIR1910-201ENST00000636955 80 ntBASIC3.67□□□□□ -1.82
APOA1P02647 U6.98-201ENST00000637157 84 ntBASIC3.67□□□□□ -1.82
APOA1P02647 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
APOA1P02647 PWAR6-201ENST00000552334 4618 ntBASIC3.67□□□□□ -1.82
APOA1P02647 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOA1P02647 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOA1P02647 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOA1P02647 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOA1P02647 MTND5P3-201ENST00000438536 1800 ntBASIC3.67□□□□□ -1.82
APOA1P02647 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
APOA1P02647 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOA1P02647 MTND4P31-201ENST00000425607 1343 ntBASIC3.67□□□□□ -1.82
APOA1P02647 AC109780.1-201ENST00000451768 1344 ntBASIC3.67□□□□□ -1.82
APOA1P02647 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOA1P02647 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOA1P02647 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
APOA1P02647 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOA1P02647 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
APOA1P02647 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.66□□□□□ -1.82
APOA1P02647 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.66□□□□□ -1.82
APOA1P02647 AC000367.1-201ENST00000452711 1766 ntBASIC3.66□□□□□ -1.82
APOA1P02647 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.66□□□□□ -1.82
APOA1P02647 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
APOA1P02647 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
APOA1P02647 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
APOA1P02647 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
APOA1P02647 MIR323A-201ENST00000362199 86 ntBASIC3.66□□□□□ -1.82
APOA1P02647 RNA5SP189-201ENST00000364920 115 ntBASIC3.66□□□□□ -1.82
APOA1P02647 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.66□□□□□ -1.82
APOA1P02647 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.66□□□□□ -1.82
APOA1P02647 AC097374.1-203ENST00000400783 485 ntBASIC3.66□□□□□ -1.82
APOA1P02647 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.66□□□□□ -1.82
APOA1P02647 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC3.66□□□□□ -1.82
APOA1P02647 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.66□□□□□ -1.82
APOA1P02647 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.66□□□□□ -1.82
APOA1P02647 AC146507.1-201ENST00000468335 354 ntBASIC3.66□□□□□ -1.82
APOA1P02647 AC006499.3-201ENST00000506077 748 ntBASIC3.66□□□□□ -1.82
APOA1P02647 AC026726.1-201ENST00000512859 601 ntBASIC3.66□□□□□ -1.82
APOA1P02647 AC093755.1-201ENST00000512950 1023 ntBASIC3.66□□□□□ -1.82
APOA1P02647 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.66□□□□□ -1.82
APOA1P02647 OR5BC1P-201ENST00000529327 739 ntBASIC3.66□□□□□ -1.82
APOA1P02647 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.66□□□□□ -1.82
APOA1P02647 AL121594.4-201ENST00000556211 1196 ntBASIC3.66□□□□□ -1.82
APOA1P02647 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.66□□□□□ -1.82
APOA1P02647 ZNF192P1-203ENST00000565888 810 ntBASIC3.66□□□□□ -1.82
APOA1P02647 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.66□□□□□ -1.82
APOA1P02647 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.66□□□□□ -1.82
APOA1P02647 AC010928.3-201ENST00000587712 541 ntBASIC3.66□□□□□ -1.82
APOA1P02647 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOA1P02647 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOA1P02647 AP004607.9-201ENST00000618202 316 ntBASIC3.66□□□□□ -1.82
APOA1P02647 AC048347.1-201ENST00000624621 427 ntBASIC3.66□□□□□ -1.82
APOA1P02647 AP005264.7-201ENST00000625003 745 ntBASIC3.66□□□□□ -1.82
APOA1P02647 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
APOA1P02647 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
APOA1P02647 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOA1P02647 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.65□□□□□ -1.82
APOA1P02647 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
APOA1P02647 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOA1P02647 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOA1P02647 AL157700.1-201ENST00000561973 1432 ntBASIC3.65□□□□□ -1.83
APOA1P02647 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
APOA1P02647 RNA5SP191-201ENST00000362585 102 ntBASIC3.65□□□□□ -1.83
APOA1P02647 SNORA31-201ENST00000362607 130 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms