Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC015849.2-201ENST00000605738 409 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AL021368.1-201ENST00000607490 540 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 MIR7973-1-201ENST00000614683 76 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AC095038.2-201ENST00000621464 1070 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AP005264.7-201ENST00000625003 745 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AC025031.4-201ENST00000621248 3271 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 SDAD1P1-202ENST00000524156 2051 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 PRO1804-201ENST00000623780 2050 ntBASIC3.15□□□□□ -1.91
HLA-DQA1P01909 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA1P01909 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC096656.1-201ENST00000623826 1364 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 GTF2H2B-203ENST00000508065 1432 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC021146.4-201ENST00000309229 279 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AL590240.1-201ENST00000334118 313 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 RNU4-31P-201ENST00000384211 141 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 XKRYP4-201ENST00000414395 483 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC009965.2-201ENST00000425328 970 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC007559.1-201ENST00000428736 355 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 CEACAMP1-201ENST00000434624 1035 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AL031663.1-201ENST00000437445 219 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 MED6P1-201ENST00000439659 713 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 RPL23AP43-201ENST00000446445 471 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 XKRYP5-201ENST00000449659 483 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 SNORA31.13-201ENST00000516624 135 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC103833.1-201ENST00000517442 172 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC007424.1-203ENST00000554613 687 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AL109766.1-201ENST00000555080 552 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AGGF1P8-201ENST00000562979 1000 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 HNRNPCP4-201ENST00000571636 900 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC133644.2-201ENST00000608142 540 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 MIR6853-201ENST00000619642 74 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 PHKBP1-201ENST00000450951 1951 ntBASIC3.14□□□□□ -1.91
HLA-DQA1P01909 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA1P01909 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC114546.3-201ENST00000623582 1734 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 MIR142-201ENST00000384835 87 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 MIR550A3-201ENST00000390735 95 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 TAF9BP2-201ENST00000400856 499 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 RNA5SP113-201ENST00000410486 84 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AL139128.1-201ENST00000413921 941 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AL357078.2-201ENST00000416486 427 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 BX510359.2-201ENST00000417920 305 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 TRGV6-201ENST00000417928 299 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 AC004074.1-201ENST00000421810 1063 ntBASIC3.13□□□□□ -1.91
HLA-DQA1P01909 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQA1P01909 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms