Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFP01375 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.73□□□□□ -1.81
TNFP01375 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFP01375 RN7SKP157-201ENST00000516174 282 ntBASIC3.73□□□□□ -1.81
TNFP01375 AC008126.1-201ENST00000549019 480 ntBASIC3.73□□□□□ -1.81
TNFP01375 AP005901.4-201ENST00000577336 569 ntBASIC3.73□□□□□ -1.81
TNFP01375 BNIP3P22-201ENST00000593399 556 ntBASIC3.73□□□□□ -1.81
TNFP01375 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFP01375 AC012603.1-201ENST00000606424 528 ntBASIC3.73□□□□□ -1.81
TNFP01375 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFP01375 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFP01375 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFP01375 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFP01375 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFP01375 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TNFP01375 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFP01375 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFP01375 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFP01375 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
TNFP01375 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFP01375 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFP01375 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
TNFP01375 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFP01375 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFP01375 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFP01375 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFP01375 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFP01375 LINC01881-201ENST00000416103 412 ntBASIC3.72□□□□□ -1.81
TNFP01375 RPL6P21-201ENST00000418672 846 ntBASIC3.72□□□□□ -1.81
TNFP01375 TCEA1P2-201ENST00000420496 906 ntBASIC3.72□□□□□ -1.81
TNFP01375 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFP01375 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFP01375 ELOCP8-201ENST00000439309 332 ntBASIC3.72□□□□□ -1.81
TNFP01375 ELOCP15-201ENST00000442090 332 ntBASIC3.72□□□□□ -1.81
TNFP01375 AL157884.3-201ENST00000448273 1184 ntBASIC3.72□□□□□ -1.81
TNFP01375 CDH12P2-201ENST00000504393 298 ntBASIC3.72□□□□□ -1.81
TNFP01375 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFP01375 IGHV3-63-201ENST00000518422 341 ntBASIC3.72□□□□□ -1.81
TNFP01375 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFP01375 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFP01375 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TNFP01375 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFP01375 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFP01375 HMGB3P26-201ENST00000560051 582 ntBASIC3.72□□□□□ -1.81
TNFP01375 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFP01375 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFP01375 HNRNPCP4-201ENST00000571636 900 ntBASIC3.72□□□□□ -1.81
TNFP01375 CCDC58P3-201ENST00000590792 430 ntBASIC3.72□□□□□ -1.81
TNFP01375 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.72□□□□□ -1.81
TNFP01375 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFP01375 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFP01375 MAPK10-372ENST00000641954 3413 ntBASIC3.72□□□□□ -1.81
TNFP01375 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFP01375 IPO8P1-201ENST00000455509 3109 ntBASIC3.72□□□□□ -1.81
TNFP01375 AC068254.2-201ENST00000623938 3577 ntBASIC3.72□□□□□ -1.81
TNFP01375 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFP01375 AP001486.2-201ENST00000561652 5113 ntBASIC3.71□□□□□ -1.81
TNFP01375 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
TNFP01375 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFP01375 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFP01375 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFP01375 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TNFP01375 SNORD3H-201ENST00000384486 214 ntBASIC3.71□□□□□ -1.82
TNFP01375 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFP01375 ELOCP18-201ENST00000434209 337 ntBASIC3.71□□□□□ -1.82
TNFP01375 AL357520.1-201ENST00000441557 453 ntBASIC3.71□□□□□ -1.82
TNFP01375 NPM1P39-201ENST00000449818 867 ntBASIC3.71□□□□□ -1.82
TNFP01375 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFP01375 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.71□□□□□ -1.82
TNFP01375 UBA52P3-201ENST00000491303 382 ntBASIC3.71□□□□□ -1.82
TNFP01375 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFP01375 AC026403.1-201ENST00000518938 295 ntBASIC3.71□□□□□ -1.82
TNFP01375 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFP01375 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFP01375 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFP01375 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFP01375 SULT1C2P2-201ENST00000562517 294 ntBASIC3.71□□□□□ -1.82
TNFP01375 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFP01375 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.71□□□□□ -1.82
TNFP01375 AC068020.1-201ENST00000594215 661 ntBASIC3.71□□□□□ -1.82
TNFP01375 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TNFP01375 AC024220.1-201ENST00000603675 484 ntBASIC3.71□□□□□ -1.82
TNFP01375 AC015722.2-201ENST00000622210 551 ntBASIC3.71□□□□□ -1.82
TNFP01375 ATE1-AS1-202ENST00000636460 506 ntBASIC3.71□□□□□ -1.82
TNFP01375 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
TNFP01375 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFP01375 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFP01375 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TNFP01375 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFP01375 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFP01375 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFP01375 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFP01375 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TNFP01375 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TNFP01375 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TNFP01375 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TNFP01375 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TNFP01375 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.7□□□□□ -1.82
TNFP01375 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TNFP01375 RNA5SP52-201ENST00000362448 134 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms