Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MIR3065-201ENST00000390137 79 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 TCEA1P4-201ENST00000415066 844 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 CYCSP10-201ENST00000417973 294 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 DPPA2P2-201ENST00000418220 897 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC013429.2-201ENST00000418798 781 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 MTND2P40-201ENST00000436718 841 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 MTND2P22-201ENST00000444325 1033 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 RPL34P26-201ENST00000445636 354 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 VN1R40P-201ENST00000455196 941 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC119751.1-201ENST00000513357 765 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 IFITM8P-201ENST00000522529 394 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC013444.2-201ENST00000603317 787 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 AL049844.2-201ENST00000604280 628 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC112230.1-201ENST00000604342 547 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC009948.4-201ENST00000604692 675 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC107952.2-201ENST00000606048 486 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 AL121772.2-201ENST00000614331 297 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 FRG1HP-204ENST00000617940 757 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC010975.3-201ENST00000618727 978 ntBASIC6.69□□□□□ -1.34
RAPGEF3O95398 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RAPGEF3O95398 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RAPGEF3O95398 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RAPGEF3O95398 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RAPGEF3O95398 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RAPGEF3O95398 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RAPGEF3O95398 AC092162.3-201ENST00000624511 1624 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC083837.1-201ENST00000565297 2994 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RAPGEF3O95398 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 RNA5SP27-201ENST00000363839 119 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 Y_RNA.578-201ENST00000390903 88 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 RPS7P9-201ENST00000414704 586 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 COX6B1P7-201ENST00000430845 235 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 AL050341.1-201ENST00000447743 313 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 RPS6P2-201ENST00000454208 705 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 RPS27AP17-201ENST00000463344 455 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 MRPS36P3-201ENST00000519284 130 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 RPL23AP53-201ENST00000521854 457 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 HMGB1P1-201ENST00000522557 636 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC096586.1-201ENST00000610267 561 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 AL138478.1-201ENST00000612252 832 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 AL121895.2-201ENST00000619558 447 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 AC091304.6-201ENST00000619761 202 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 AL445363.3-201ENST00000623080 671 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RAPGEF3O95398 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 MAPK10-328ENST00000641553 4009 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 OR51H2P-202ENST00000641424 3046 ntBASIC6.68□□□□□ -1.34
RAPGEF3O95398 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
RAPGEF3O95398 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RAPGEF3O95398 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RAPGEF3O95398 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RAPGEF3O95398 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 RNU6-224P-201ENST00000384055 107 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 SNORD116-12-201ENST00000384468 92 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 SNORD65C-201ENST00000390962 71 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 MTCO1P56-201ENST00000401674 224 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 AP000357.1-201ENST00000409926 1165 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 AL050321.1-201ENST00000432363 400 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 PPIAP13-201ENST00000434706 478 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 AC092473.1-201ENST00000441098 221 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms