Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RN7SKP100-201ENST00000411258 284 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.42□□□□□ -1.86
UPK1BO75841 ARF4P2-201ENST00000430209 526 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 FTH1P6-201ENST00000430768 320 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 MRPS33P4-201ENST00000434892 317 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 TPTE2P1-204ENST00000435256 593 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 RPL23AP46-201ENST00000438548 490 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.42□□□□□ -1.86
UPK1BO75841 AL645939.1-201ENST00000453429 797 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.42□□□□□ -1.86
UPK1BO75841 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.42□□□□□ -1.86
UPK1BO75841 AC010401.1-201ENST00000463867 348 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 AK6-203ENST00000502819 743 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1BO75841 MTATP6P22-201ENST00000507369 598 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 AC110768.1-201ENST00000509222 400 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 AC106806.2-201ENST00000509365 500 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.42□□□□□ -1.86
UPK1BO75841 AC093770.1-201ENST00000511559 571 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.42□□□□□ -1.86
UPK1BO75841 AC025260.1-201ENST00000548858 430 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.42□□□□□ -1.86
UPK1BO75841 AL161713.1-201ENST00000555538 145 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.42□□□□□ -1.86
UPK1BO75841 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.42□□□□□ -1.86
UPK1BO75841 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1BO75841 AC069304.3-201ENST00000603938 1084 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 RAD17P1-201ENST00000418130 2042 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1BO75841 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1BO75841 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
UPK1BO75841 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1BO75841 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1BO75841 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
UPK1BO75841 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1BO75841 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1BO75841 ZNF542P-204ENST00000482727 1305 ntBASIC3.42□□□□□ -1.86
UPK1BO75841 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1BO75841 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1BO75841 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1BO75841 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1BO75841 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.41□□□□□ -1.86
UPK1BO75841 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1BO75841 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1BO75841 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1BO75841 ZNF826P-207ENST00000622273 1910 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 XIAPP3-201ENST00000312918 795 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 TMSB4XP4-201ENST00000323496 618 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 MIR331-201ENST00000362302 94 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.41□□□□□ -1.86
UPK1BO75841 U1.1-201ENST00000384101 164 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
UPK1BO75841 EI24P2-201ENST00000397776 1076 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 OR7E156P-201ENST00000400303 464 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1BO75841 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.41□□□□□ -1.86
UPK1BO75841 LINC01881-201ENST00000416103 412 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AL590139.1-201ENST00000416267 400 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AIMP1P1-201ENST00000418670 937 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1BO75841 AL049610.1-201ENST00000423374 372 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AL160175.1-201ENST00000428124 247 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1BO75841 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1BO75841 MED6P1-201ENST00000439659 713 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.41□□□□□ -1.86
UPK1BO75841 TPMTP4-201ENST00000450749 678 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC3.41□□□□□ -1.86
UPK1BO75841 AC092691.2-201ENST00000461787 803 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 RPL23AP44-201ENST00000482216 473 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 RPS3AP50-201ENST00000487064 803 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 RPL30P11-201ENST00000495304 339 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 SUMO1P1-201ENST00000497904 306 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1BO75841 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 PHBP14-201ENST00000512887 367 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.41□□□□□ -1.86
UPK1BO75841 AC013701.1-201ENST00000522657 465 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1BO75841 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1BO75841 AC008011.1-201ENST00000545989 227 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 TGIF1P1-201ENST00000558095 802 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1BO75841 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1BO75841 AC067852.4-201ENST00000590314 478 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AP001542.1-201ENST00000591314 200 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AL512782.1-201ENST00000603093 364 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 uc_338.13-201ENST00000618243 179 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AC018816.2-201ENST00000621460 353 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AC091905.4-201ENST00000623432 202 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.41□□□□□ -1.86
UPK1BO75841 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
UPK1BO75841 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1BO75841 AC007529.1-201ENST00000418574 2178 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 AC006042.3-201ENST00000454684 1469 ntBASIC3.41□□□□□ -1.86
UPK1BO75841 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.41□□□□□ -1.86
UPK1BO75841 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
UPK1BO75841 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
UPK1BO75841 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.4□□□□□ -1.87
UPK1BO75841 AP002088.1-201ENST00000382740 395 ntBASIC3.4□□□□□ -1.87
UPK1BO75841 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms