Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC009237.10-201ENST00000414112 510 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 AC009237.5-201ENST00000414271 501 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 FNDC3CP-201ENST00000420795 1155 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIN3BO60391 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIN3BO60391 RPL21P110-201ENST00000433345 446 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIN3BO60391 RPL23AP35-201ENST00000451906 501 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 snoU13.22-201ENST00000459428 104 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 RPL7P48-201ENST00000461513 746 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 TRBV8-2-201ENST00000475637 270 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 GAPDHP56-201ENST00000506031 988 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIN3BO60391 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIN3BO60391 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIN3BO60391 AC012400.1-201ENST00000518452 381 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 AP003392.2-201ENST00000527269 208 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.5□□□□□ -1.37
GRIN3BO60391 AL163952.1-202ENST00000569625 600 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 MIR4715-201ENST00000584117 79 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.5□□□□□ -1.37
GRIN3BO60391 AL512782.1-201ENST00000603093 364 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 U1.25-201ENST00000614085 162 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 AC013476.2-201ENST00000614456 459 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 U1.31-201ENST00000620022 160 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 AC022140.2-201ENST00000623500 188 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 AC021106.3-201ENST00000623925 531 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 AC034229.5-201ENST00000624258 185 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 AC244258.1-201ENST00000637553 1071 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 AC099654.10-201ENST00000640395 161 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GRIN3BO60391 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GRIN3BO60391 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIN3BO60391 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GRIN3BO60391 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.5□□□□□ -1.37
GRIN3BO60391 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIN3BO60391 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIN3BO60391 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
GRIN3BO60391 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GRIN3BO60391 AP000547.3-204ENST00000588548 2523 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GRIN3BO60391 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
GRIN3BO60391 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
GRIN3BO60391 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
GRIN3BO60391 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC6.49□□□□□ -1.37
GRIN3BO60391 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GRIN3BO60391 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
GRIN3BO60391 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.49□□□□□ -1.37
GRIN3BO60391 FGF7P2-201ENST00000332473 296 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 RNU5D-1-201ENST00000363299 116 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 SNORA37-201ENST00000384504 129 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 MIR134-201ENST00000385258 73 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 AL161909.1-201ENST00000397390 712 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.49□□□□□ -1.37
GRIN3BO60391 ZNF603P-201ENST00000405613 487 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 AL591848.1-201ENST00000413092 322 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 OR51A3P-201ENST00000413596 924 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.49□□□□□ -1.37
GRIN3BO60391 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIN3BO60391 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIN3BO60391 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIN3BO60391 RHOT1P3-201ENST00000436571 331 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.49□□□□□ -1.37
GRIN3BO60391 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
GRIN3BO60391 RPL36AP15-201ENST00000444514 266 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 COX6CP18-201ENST00000448769 222 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 AC093392.2-201ENST00000450682 337 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 RBMY2TP-201ENST00000451162 947 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 OR6C5P-201ENST00000452388 923 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GRIN3BO60391 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
GRIN3BO60391 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIN3BO60391 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.49□□□□□ -1.37
GRIN3BO60391 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.49□□□□□ -1.37
GRIN3BO60391 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIN3BO60391 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIN3BO60391 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIN3BO60391 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIN3BO60391 AC009237.13-201ENST00000603193 276 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 MEMO1P5-201ENST00000604810 406 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 AC007684.1-201ENST00000609671 477 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIN3BO60391 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.49□□□□□ -1.37
GRIN3BO60391 AC004520.1-201ENST00000608362 1413 ntBASIC6.49□□□□□ -1.37
GRIN3BO60391 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
GRIN3BO60391 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
GRIN3BO60391 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GRIN3BO60391 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
GRIN3BO60391 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GRIN3BO60391 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.49□□□□□ -1.37
GRIN3BO60391 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GRIN3BO60391 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GRIN3BO60391 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.48□□□□□ -1.37
GRIN3BO60391 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GRIN3BO60391 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GRIN3BO60391 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
GRIN3BO60391 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GRIN3BO60391 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
GRIN3BO60391 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.48□□□□□ -1.37
GRIN3BO60391 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms