Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 DEFB130C-202ENST00000530001 230 ntBASIC4.32□□□□□ -1.72
SSX4O60224 AC063949.1-201ENST00000552900 865 ntBASIC4.32□□□□□ -1.72
SSX4O60224 NMNAT1P1-201ENST00000554095 876 ntBASIC4.32□□□□□ -1.72
SSX4O60224 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX4O60224 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX4O60224 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.32□□□□□ -1.72
SSX4O60224 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.32□□□□□ -1.72
SSX4O60224 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.32□□□□□ -1.72
SSX4O60224 MIR4270-201ENST00000581799 70 ntBASIC4.32□□□□□ -1.72
SSX4O60224 NF1P5-201ENST00000588287 448 ntBASIC4.32□□□□□ -1.72
SSX4O60224 AP001160.4-201ENST00000596971 382 ntBASIC4.32□□□□□ -1.72
SSX4O60224 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.32□□□□□ -1.72
SSX4O60224 RNU4-5P-201ENST00000607255 135 ntBASIC4.32□□□□□ -1.72
SSX4O60224 AP000238.1-201ENST00000608759 426 ntBASIC4.32□□□□□ -1.72
SSX4O60224 AL161616.1-201ENST00000611867 286 ntBASIC4.32□□□□□ -1.72
SSX4O60224 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.32□□□□□ -1.72
SSX4O60224 AC004232.3-201ENST00000622977 525 ntBASIC4.32□□□□□ -1.72
SSX4O60224 AL109659.3-201ENST00000624985 950 ntBASIC4.32□□□□□ -1.72
SSX4O60224 BMS1P21-201ENST00000634565 365 ntBASIC4.32□□□□□ -1.72
SSX4O60224 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SSX4O60224 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSX4O60224 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX4O60224 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX4O60224 AL592182.3-201ENST00000642132 3304 ntBASIC4.32□□□□□ -1.72
SSX4O60224 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSX4O60224 AC090971.4-201ENST00000560291 1800 ntBASIC4.32□□□□□ -1.72
SSX4O60224 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX4O60224 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSX4O60224 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
SSX4O60224 AC016588.2-201ENST00000632484 3021 ntBASIC4.32□□□□□ -1.72
SSX4O60224 ECM1P2-201ENST00000503354 1577 ntBASIC4.31□□□□□ -1.72
SSX4O60224 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSX4O60224 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX4O60224 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SSX4O60224 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX4O60224 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SSX4O60224 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX4O60224 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX4O60224 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX4O60224 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX4O60224 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSX4O60224 AC011155.1-201ENST00000316512 456 ntBASIC4.31□□□□□ -1.72
SSX4O60224 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX4O60224 RNU1-87P-201ENST00000363727 170 ntBASIC4.31□□□□□ -1.72
SSX4O60224 MIR192-201ENST00000384915 110 ntBASIC4.31□□□□□ -1.72
SSX4O60224 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
SSX4O60224 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX4O60224 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX4O60224 GTF2IP2-201ENST00000424290 697 ntBASIC4.31□□□□□ -1.72
SSX4O60224 NANOGP5-201ENST00000424456 877 ntBASIC4.31□□□□□ -1.72
SSX4O60224 MTCYBP32-201ENST00000427945 1084 ntBASIC4.31□□□□□ -1.72
SSX4O60224 RPL12P46-201ENST00000436610 195 ntBASIC4.31□□□□□ -1.72
SSX4O60224 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX4O60224 NPM1P13-201ENST00000452663 865 ntBASIC4.31□□□□□ -1.72
SSX4O60224 RPS17P2-201ENST00000461663 408 ntBASIC4.31□□□□□ -1.72
SSX4O60224 AC063943.1-201ENST00000465434 453 ntBASIC4.31□□□□□ -1.72
SSX4O60224 OR52A4P-201ENST00000472867 958 ntBASIC4.31□□□□□ -1.72
SSX4O60224 AC104689.1-201ENST00000473356 768 ntBASIC4.31□□□□□ -1.72
SSX4O60224 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX4O60224 RPL21P131-201ENST00000497298 483 ntBASIC4.31□□□□□ -1.72
SSX4O60224 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX4O60224 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX4O60224 AC008885.2-201ENST00000509506 930 ntBASIC4.31□□□□□ -1.72
SSX4O60224 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX4O60224 OR51K1P-201ENST00000510214 950 ntBASIC4.31□□□□□ -1.72
SSX4O60224 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX4O60224 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.31□□□□□ -1.72
SSX4O60224 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX4O60224 DYNLL1P4-201ENST00000549314 266 ntBASIC4.31□□□□□ -1.72
SSX4O60224 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSX4O60224 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX4O60224 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX4O60224 AC027455.1-201ENST00000574104 594 ntBASIC4.31□□□□□ -1.72
SSX4O60224 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.31□□□□□ -1.72
SSX4O60224 BPTFP1-201ENST00000579209 492 ntBASIC4.31□□□□□ -1.72
SSX4O60224 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX4O60224 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX4O60224 AL020997.3-201ENST00000602843 359 ntBASIC4.31□□□□□ -1.72
SSX4O60224 AC105254.2-201ENST00000603636 436 ntBASIC4.31□□□□□ -1.72
SSX4O60224 MEMO1P5-201ENST00000604810 406 ntBASIC4.31□□□□□ -1.72
SSX4O60224 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX4O60224 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX4O60224 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX4O60224 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSX4O60224 TLK1P1-201ENST00000456760 2440 ntBASIC4.31□□□□□ -1.72
SSX4O60224 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX4O60224 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX4O60224 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 AL031119.1-201ENST00000404707 1879 ntBASIC4.3□□□□□ -1.72
SSX4O60224 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX4O60224 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SSX4O60224 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 SGO1P1-201ENST00000603525 1447 ntBASIC4.3□□□□□ -1.72
SSX4O60224 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX4O60224 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 437.5 ms