Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCEO43556 GSTA7P-201ENST00000438425 448 ntBASIC3.68□□□□□ -1.82
SGCEO43556 CYCSP42-201ENST00000450823 238 ntBASIC3.68□□□□□ -1.82
SGCEO43556 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.68□□□□□ -1.82
SGCEO43556 AC009963.2-201ENST00000453431 138 ntBASIC3.68□□□□□ -1.82
SGCEO43556 SNRPGP5-201ENST00000456003 220 ntBASIC3.68□□□□□ -1.82
SGCEO43556 RNU7-170P-201ENST00000459303 61 ntBASIC3.68□□□□□ -1.82
SGCEO43556 AC007537.2-201ENST00000472093 511 ntBASIC3.68□□□□□ -1.82
SGCEO43556 RN7SL691P-201ENST00000494487 301 ntBASIC3.68□□□□□ -1.82
SGCEO43556 AC017037.1-201ENST00000508460 471 ntBASIC3.68□□□□□ -1.82
SGCEO43556 AC008958.1-201ENST00000511047 682 ntBASIC3.68□□□□□ -1.82
SGCEO43556 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.68□□□□□ -1.82
SGCEO43556 AC009643.1-201ENST00000532030 391 ntBASIC3.68□□□□□ -1.82
SGCEO43556 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCEO43556 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.68□□□□□ -1.82
SGCEO43556 AC008083.2-201ENST00000546707 476 ntBASIC3.68□□□□□ -1.82
SGCEO43556 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCEO43556 PSMB7P1-201ENST00000556349 514 ntBASIC3.68□□□□□ -1.82
SGCEO43556 MIR4277-201ENST00000578298 84 ntBASIC3.68□□□□□ -1.82
SGCEO43556 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCEO43556 AL355816.1-201ENST00000607951 118 ntBASIC3.68□□□□□ -1.82
SGCEO43556 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.68□□□□□ -1.82
SGCEO43556 AL121890.3-201ENST00000618494 516 ntBASIC3.68□□□□□ -1.82
SGCEO43556 AP003072.4-201ENST00000624580 310 ntBASIC3.68□□□□□ -1.82
SGCEO43556 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
SGCEO43556 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SGCEO43556 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SGCEO43556 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
SGCEO43556 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SGCEO43556 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SGCEO43556 RNA5SP388-201ENST00000362584 119 ntBASIC3.67□□□□□ -1.82
SGCEO43556 U3.15-201ENST00000365398 212 ntBASIC3.67□□□□□ -1.82
SGCEO43556 U3.22-201ENST00000391120 215 ntBASIC3.67□□□□□ -1.82
SGCEO43556 RNU4-25P-201ENST00000410569 230 ntBASIC3.67□□□□□ -1.82
SGCEO43556 AC016769.2-201ENST00000414815 475 ntBASIC3.67□□□□□ -1.82
SGCEO43556 AC023141.6-201ENST00000429418 337 ntBASIC3.67□□□□□ -1.82
SGCEO43556 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.67□□□□□ -1.82
SGCEO43556 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.67□□□□□ -1.82
SGCEO43556 RN7SL585P-201ENST00000470538 280 ntBASIC3.67□□□□□ -1.82
SGCEO43556 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.67□□□□□ -1.82
SGCEO43556 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.67□□□□□ -1.82
SGCEO43556 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.67□□□□□ -1.82
SGCEO43556 CDH12P2-201ENST00000504393 298 ntBASIC3.67□□□□□ -1.82
SGCEO43556 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.67□□□□□ -1.82
SGCEO43556 AC025674.1-201ENST00000507074 324 ntBASIC3.67□□□□□ -1.82
SGCEO43556 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.67□□□□□ -1.82
SGCEO43556 FTH1P9-201ENST00000513251 355 ntBASIC3.67□□□□□ -1.82
SGCEO43556 AC034244.2-201ENST00000514668 858 ntBASIC3.67□□□□□ -1.82
SGCEO43556 OR4C2P-201ENST00000530855 1064 ntBASIC3.67□□□□□ -1.82
SGCEO43556 AC105233.3-201ENST00000531125 744 ntBASIC3.67□□□□□ -1.82
SGCEO43556 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.67□□□□□ -1.82
SGCEO43556 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.67□□□□□ -1.82
SGCEO43556 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.67□□□□□ -1.82
SGCEO43556 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.67□□□□□ -1.82
SGCEO43556 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.67□□□□□ -1.82
SGCEO43556 AC008745.1-201ENST00000604064 271 ntBASIC3.67□□□□□ -1.82
SGCEO43556 Z82195.1-201ENST00000604558 398 ntBASIC3.67□□□□□ -1.82
SGCEO43556 AC005021.1-201ENST00000608730 355 ntBASIC3.67□□□□□ -1.82
SGCEO43556 AL391261.4-201ENST00000616012 481 ntBASIC3.67□□□□□ -1.82
SGCEO43556 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.67□□□□□ -1.82
SGCEO43556 AC116563.2-201ENST00000624751 535 ntBASIC3.67□□□□□ -1.82
SGCEO43556 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.67□□□□□ -1.82
SGCEO43556 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.67□□□□□ -1.82
SGCEO43556 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SGCEO43556 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
SGCEO43556 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SGCEO43556 MTCO1P14-201ENST00000441695 1559 ntBASIC3.67□□□□□ -1.82
SGCEO43556 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SGCEO43556 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SGCEO43556 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SGCEO43556 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SGCEO43556 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.67□□□□□ -1.82
SGCEO43556 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.66□□□□□ -1.82
SGCEO43556 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SGCEO43556 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.66□□□□□ -1.82
SGCEO43556 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.66□□□□□ -1.82
SGCEO43556 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SGCEO43556 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.66□□□□□ -1.82
SGCEO43556 RNU1-132P-201ENST00000364300 164 ntBASIC3.66□□□□□ -1.82
SGCEO43556 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.66□□□□□ -1.82
SGCEO43556 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SGCEO43556 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SGCEO43556 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SGCEO43556 ST13P16-201ENST00000401760 781 ntBASIC3.66□□□□□ -1.82
SGCEO43556 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.66□□□□□ -1.82
SGCEO43556 AF228730.2-201ENST00000438784 848 ntBASIC3.66□□□□□ -1.82
SGCEO43556 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SGCEO43556 SERPINA7P1-201ENST00000443077 631 ntBASIC3.66□□□□□ -1.82
SGCEO43556 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SGCEO43556 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.66□□□□□ -1.82
SGCEO43556 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.66□□□□□ -1.82
SGCEO43556 AC017007.3-201ENST00000479865 435 ntBASIC3.66□□□□□ -1.82
SGCEO43556 AC006517.1-201ENST00000480485 328 ntBASIC3.66□□□□□ -1.82
SGCEO43556 NDUFB4P9-201ENST00000511646 388 ntBASIC3.66□□□□□ -1.82
SGCEO43556 ACTR6P1-201ENST00000514311 1104 ntBASIC3.66□□□□□ -1.82
SGCEO43556 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.66□□□□□ -1.82
SGCEO43556 NARSP2-201ENST00000518524 679 ntBASIC3.66□□□□□ -1.82
SGCEO43556 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.66□□□□□ -1.82
SGCEO43556 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.66□□□□□ -1.82
SGCEO43556 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms