Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 FABP5P3-201ENST00000437960 408 ntBASIC4.39□□□□□ -1.71
RTCAO00442 Z77249.1-201ENST00000444622 1175 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.39□□□□□ -1.71
RTCAO00442 HMGN2P21-201ENST00000447764 270 ntBASIC4.39□□□□□ -1.71
RTCAO00442 SETP6-201ENST00000479329 568 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AC092902.1-201ENST00000486999 259 ntBASIC4.39□□□□□ -1.71
RTCAO00442 MTND4LP2-201ENST00000502312 285 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AC108145.1-201ENST00000503770 153 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.39□□□□□ -1.71
RTCAO00442 IGBP1P5-201ENST00000507524 1000 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.39□□□□□ -1.71
RTCAO00442 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.39□□□□□ -1.71
RTCAO00442 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.39□□□□□ -1.71
RTCAO00442 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.39□□□□□ -1.71
RTCAO00442 AP003102.1-201ENST00000525638 661 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AC019227.1-201ENST00000526902 510 ntBASIC4.39□□□□□ -1.71
RTCAO00442 RFPL1S-203ENST00000539579 330 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.39□□□□□ -1.71
RTCAO00442 AC006518.1-201ENST00000541449 943 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.39□□□□□ -1.71
RTCAO00442 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.39□□□□□ -1.71
RTCAO00442 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.39□□□□□ -1.71
RTCAO00442 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.39□□□□□ -1.71
RTCAO00442 AC121761.2-201ENST00000617300 689 ntBASIC4.39□□□□□ -1.71
RTCAO00442 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.39□□□□□ -1.71
RTCAO00442 AL391262.2-201ENST00000622466 494 ntBASIC4.39□□□□□ -1.71
RTCAO00442 A2MP1-204ENST00000566278 4130 ntBASIC4.39□□□□□ -1.71
RTCAO00442 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTCAO00442 AC017007.4-201ENST00000503353 1352 ntBASIC4.39□□□□□ -1.71
RTCAO00442 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RTCAO00442 MARK2P15-201ENST00000432204 2186 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
RTCAO00442 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTCAO00442 AC021146.4-201ENST00000309229 279 ntBASIC4.38□□□□□ -1.71
RTCAO00442 RN7SKP115-201ENST00000363177 317 ntBASIC4.38□□□□□ -1.71
RTCAO00442 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTCAO00442 HMGB3P18-201ENST00000406327 590 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.38□□□□□ -1.71
RTCAO00442 UBE2V1P1-201ENST00000430836 445 ntBASIC4.38□□□□□ -1.71
RTCAO00442 CDY14P-201ENST00000431260 1014 ntBASIC4.38□□□□□ -1.71
RTCAO00442 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.38□□□□□ -1.71
RTCAO00442 PTP4A1P3-201ENST00000433661 420 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AL512661.1-201ENST00000434586 1253 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.38□□□□□ -1.71
RTCAO00442 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.38□□□□□ -1.71
RTCAO00442 AC006466.1-201ENST00000438721 289 ntBASIC4.38□□□□□ -1.71
RTCAO00442 CDY12P-201ENST00000440679 1015 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AL158053.1-201ENST00000441503 453 ntBASIC4.38□□□□□ -1.71
RTCAO00442 CDY13P-201ENST00000445813 1015 ntBASIC4.38□□□□□ -1.71
RTCAO00442 CDY23P-201ENST00000451661 1014 ntBASIC4.38□□□□□ -1.71
RTCAO00442 MRPL35P4-201ENST00000453682 566 ntBASIC4.38□□□□□ -1.71
RTCAO00442 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.38□□□□□ -1.71
RTCAO00442 AL035407.2-201ENST00000454090 378 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC008280.2-201ENST00000455473 307 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AL445433.1-201ENST00000457507 257 ntBASIC4.38□□□□□ -1.71
RTCAO00442 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.38□□□□□ -1.71
RTCAO00442 SCARNA10-201ENST00000459255 330 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC006967.1-201ENST00000467608 589 ntBASIC4.38□□□□□ -1.71
RTCAO00442 RN7SL354P-201ENST00000469282 294 ntBASIC4.38□□□□□ -1.71
RTCAO00442 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
RTCAO00442 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTCAO00442 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.38□□□□□ -1.71
RTCAO00442 TMEM248P1-201ENST00000510579 951 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC121161.1-201ENST00000510606 652 ntBASIC4.38□□□□□ -1.71
RTCAO00442 HMGB1P23-201ENST00000518743 568 ntBASIC4.38□□□□□ -1.71
RTCAO00442 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.38□□□□□ -1.71
RTCAO00442 AC139103.1-201ENST00000534696 1030 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.38□□□□□ -1.71
RTCAO00442 AC104229.1-201ENST00000561364 255 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.38□□□□□ -1.71
RTCAO00442 MIR4270-201ENST00000581799 70 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC124283.4-201ENST00000581815 456 ntBASIC4.38□□□□□ -1.71
RTCAO00442 MTATP6P2-201ENST00000603319 678 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC004232.3-201ENST00000622977 525 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC010872.1-201ENST00000624225 675 ntBASIC4.38□□□□□ -1.71
RTCAO00442 AC108467.2-201ENST00000617640 1597 ntBASIC4.38□□□□□ -1.71
RTCAO00442 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.38□□□□□ -1.71
RTCAO00442 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTCAO00442 AC139713.2-215ENST00000641428 5037 ntBASIC4.38□□□□□ -1.71
RTCAO00442 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTCAO00442 AL136520.1-201ENST00000600311 1322 ntBASIC4.38□□□□□ -1.71
RTCAO00442 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTCAO00442 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTCAO00442 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RTCAO00442 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.38□□□□□ -1.71
RTCAO00442 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.38□□□□□ -1.71
RTCAO00442 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTCAO00442 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RTCAO00442 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTCAO00442 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RTCAO00442 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RTCAO00442 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTCAO00442 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTCAO00442 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.37□□□□□ -1.71
RTCAO00442 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTCAO00442 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
RTCAO00442 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RTCAO00442 RNU6-1339P-201ENST00000363574 91 ntBASIC4.37□□□□□ -1.71
RTCAO00442 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms