Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RPS7P5-201ENST00000441482 581 ntBASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 AC006480.1-201ENST00000449887 378 ntBASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 RNU7-27P-201ENST00000459281 62 ntBASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 Y_RNA.710-201ENST00000516975 110 ntBASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 AP005597.4-201ENST00000526762 229 ntBASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 AC092375.1-201ENST00000550410 637 ntBASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 AC116312.1-201ENST00000606841 314 ntBASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 AC068870.2-201ENST00000620635 389 ntBASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 AC062022.1-201ENST00000451026 1684 ntBASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 MTND5P3-201ENST00000438536 1800 ntBASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
ZC3H4Q9UPT8 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AC079753.1-201ENST00000623243 3868 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 NMD3P1-201ENST00000439704 1488 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 SNORA75.4-201ENST00000391278 119 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AC073264.1-201ENST00000411508 416 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AL596448.1-201ENST00000415024 392 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AL589872.1-201ENST00000426602 288 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 GPM6BP2-201ENST00000432046 144 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 GPM6BP1-201ENST00000446387 144 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 RN7SL184P-201ENST00000488308 297 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 RN7SL30P-201ENST00000488416 306 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 HAUS8P1-201ENST00000549005 542 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 MIR5095-201ENST00000578844 88 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AP006248.2-201ENST00000623309 592 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AC138305.3-201ENST00000624988 240 ntBASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.45□□□□□ -1.22
ZC3H4Q9UPT8 AC092162.3-201ENST00000624511 1624 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 Y_RNA.157-201ENST00000363638 102 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 MIR320B1-201ENST00000390209 79 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 RPL35AP12-201ENST00000425362 338 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 FABP7P2-201ENST00000429946 379 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 SNRPEP7-201ENST00000438350 220 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 RPL17P49-201ENST00000443728 411 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 BX842559.2-201ENST00000451418 605 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC073594.1-201ENST00000462065 364 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 OR2AO1P-201ENST00000476497 403 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC139783.2-201ENST00000504847 1145 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms