Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 JKAMPP1-201ENST00000413804 919 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 TCEA1P4-201ENST00000415066 844 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 UBE2V2P3-201ENST00000433562 437 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AC069285.2-201ENST00000440210 275 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 CYCSP53-201ENST00000455540 265 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 RPL21P11-201ENST00000461458 483 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AP000859.1-201ENST00000525536 307 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AC090877.1-201ENST00000561418 344 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AC067838.1-201ENST00000606064 577 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AL645927.2-201ENST00000618350 349 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AL354798.1-201ENST00000622505 329 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 FP236240.3-201ENST00000623061 327 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 ATE1-AS1-202ENST00000636460 506 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 BDP1P-201ENST00000582658 1990 ntBASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 AC240504.1-201ENST00000395709 845 ntBASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 HMGB3P22-202ENST00000451823 572 ntBASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 CYCSP30-201ENST00000546447 172 ntBASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 AL606490.9-201ENST00000603331 271 ntBASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 LINC00901.1-201ENST00000617252 152 ntBASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 AC006840.1-201ENST00000623069 542 ntBASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPC1L1Q9UHC9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 RNU6ATAC-201ENST00000408749 126 ntBASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 RPL37P1-201ENST00000432310 284 ntBASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 AC096638.2-201ENST00000434965 711 ntBASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 RANP8-201ENST00000444720 713 ntBASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 HNRNPKP5-201ENST00000515300 253 ntBASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 AL121839.1-201ENST00000556233 1185 ntBASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 HNRNPCP4-201ENST00000571636 900 ntBASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 AC138473.1-201ENST00000605717 526 ntBASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 AL139089.1-201ENST00000620372 975 ntBASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.26□□□□□ -1.57
NPC1L1Q9UHC9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 TTC39DP-201ENST00000416781 1688 ntBASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 RNU6-697P-201ENST00000363348 107 ntBASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 SNORD46.1-201ENST00000364139 104 ntBASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 AL390879.2-203ENST00000426943 1121 ntBASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 AL445584.1-201ENST00000431451 330 ntBASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 AC091564.1-201ENST00000464563 479 ntBASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 RN7SKP34-201ENST00000516142 244 ntBASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 AC022784.5-201ENST00000522241 437 ntBASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.25□□□□□ -1.57
NPC1L1Q9UHC9 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms