Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 RPL23AP28-201ENST00000448062 470 ntBASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 RPL7P52-201ENST00000449200 742 ntBASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 AC021074.2-201ENST00000468434 172 ntBASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 SMURF2P1-201ENST00000514992 481 ntBASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 Y_RNA.682-201ENST00000516457 100 ntBASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 SNRPCP6-201ENST00000528310 210 ntBASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 AL359757.2-201ENST00000624309 274 ntBASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 AC135068.12-201ENST00000637370 931 ntBASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 MAPK10-357ENST00000641831 2858 ntBASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 CDY7P-201ENST00000429883 1604 ntBASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 AL034417.4-202ENST00000642135 2236 ntBASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LIMD1Q9UGP4 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AL021877.2-201ENST00000624442 10684 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 MTND5P10-201ENST00000603719 1809 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 Y_RNA.452-201ENST00000384202 108 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RNU6-574P-201ENST00000384265 107 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RPL24P7-201ENST00000399435 453 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RPS4XP9-201ENST00000405151 780 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RNA5SP345-201ENST00000410646 108 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RN7SKP144-201ENST00000411108 279 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RPL37P10-201ENST00000412884 288 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RPL36P19-201ENST00000430744 301 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 PRDX1P1-201ENST00000449329 596 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 Z83838.1-202ENST00000456225 839 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RNU6-1218P-201ENST00000458990 108 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC094085.1-201ENST00000468914 584 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC025164.1-201ENST00000496249 478 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 FTH1P21-201ENST00000512179 511 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 SNORA74.1-201ENST00000516320 180 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC120036.3-201ENST00000517826 292 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC140063.1-201ENST00000541343 259 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC002310.3-201ENST00000569728 723 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 MIR3149-201ENST00000584629 83 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 UBE2L4-201ENST00000587688 464 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC020914.7-201ENST00000594477 545 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC244517.12-201ENST00000623581 663 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 AC007823.1-201ENST00000569932 1566 ntBASIC7.07□□□□□ -1.28
LIMD1Q9UGP4 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms