Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 RNU1-140P-201ENST00000365040 165 ntBASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 RPS26P4-201ENST00000431743 355 ntBASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 RPL7P48-201ENST00000461513 746 ntBASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 AC016839.1-201ENST00000578162 867 ntBASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 AC093732.2-201ENST00000607950 274 ntBASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 AL132656.3-201ENST00000606384 1595 ntBASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
RIMBP3Q9UFD9 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
RIMBP3Q9UFD9 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RIMBP3Q9UFD9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RIMBP3Q9UFD9 MAPK10-320ENST00000641462 6696 ntBASIC5.96□□□□□ -1.45
RIMBP3Q9UFD9 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.96□□□□□ -1.45
RIMBP3Q9UFD9 SNORD17-201ENST00000390930 237 ntBASIC5.96□□□□□ -1.45
RIMBP3Q9UFD9 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.96□□□□□ -1.45
RIMBP3Q9UFD9 PGBD4P8-201ENST00000412993 562 ntBASIC5.96□□□□□ -1.45
RIMBP3Q9UFD9 AF228730.2-201ENST00000438784 848 ntBASIC5.96□□□□□ -1.45
RIMBP3Q9UFD9 AC084036.1-201ENST00000609190 508 ntBASIC5.96□□□□□ -1.45
RIMBP3Q9UFD9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.96□□□□□ -1.45
RIMBP3Q9UFD9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 RPL5P18-201ENST00000406671 891 ntBASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 AL139413.1-201ENST00000421309 217 ntBASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 AC005002.1-201ENST00000447458 540 ntBASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 RPL23AP37-201ENST00000479658 549 ntBASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 Y_RNA.676-201ENST00000516393 96 ntBASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 AC103881.1-201ENST00000603476 538 ntBASIC5.96□□□□□ -1.46
RIMBP3Q9UFD9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 AL022393.1-201ENST00000625142 1677 ntBASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 SRIP2-201ENST00000428470 166 ntBASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 VN1R25P-201ENST00000443385 738 ntBASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 AC108751.2-201ENST00000469993 231 ntBASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 OR2AS2P-201ENST00000606902 342 ntBASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 AC112503.1-201ENST00000608436 391 ntBASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 AL353726.1-201ENST00000614041 1000 ntBASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 AC024341.1-201ENST00000526444 1552 ntBASIC5.95□□□□□ -1.46
RIMBP3Q9UFD9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 RNU6-304P-201ENST00000364855 107 ntBASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 RBMY1KP-201ENST00000423480 476 ntBASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 AL445433.1-201ENST00000457507 257 ntBASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 CCDC75P1-201ENST00000469247 791 ntBASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 AC124312.6-202ENST00000623624 418 ntBASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
RIMBP3Q9UFD9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 AL121878.1-201ENST00000418638 859 ntBASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 HMGB3P16-201ENST00000508037 287 ntBASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 AL359219.2-201ENST00000555184 348 ntBASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 AL354760.1-201ENST00000608357 643 ntBASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 AC138932.5-201ENST00000617759 563 ntBASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms