Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC034236.3-201ENST00000605999 461 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AL021707.7-201ENST00000607991 416 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC112503.1-201ENST00000608436 391 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 MIR486-1-201ENST00000612171 68 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AC078899.5-201ENST00000612475 178 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 AL356274.1-201ENST00000617064 410 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 OR4G3P-201ENST00000633500 913 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 CYP1D1P-201ENST00000416662 1433 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NDE1Q9NXR1 Z82217.1-201ENST00000625157 8149 ntBASIC4.17□□□□□ -1.74
NDE1Q9NXR1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AP000756.2-201ENST00000624168 2567 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 BX005019.1-201ENST00000561881 1810 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 HMGB1P10-201ENST00000395823 563 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 MIR1178-201ENST00000408396 91 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AL356535.1-201ENST00000440335 398 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 RPL23AP93-201ENST00000440847 484 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 RPS27P5-201ENST00000444247 244 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC023512.1-201ENST00000444513 499 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 OR52J1P-201ENST00000450596 932 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AURKAPS1-201ENST00000451805 1212 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC104982.1-201ENST00000478775 574 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC092851.1-201ENST00000535964 478 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC012254.4-201ENST00000588843 273 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC091057.3-201ENST00000602684 733 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC007390.2-201ENST00000606229 3803 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AP003392.5-201ENST00000607857 415 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC021851.1-201ENST00000608537 1082 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC090912.3-201ENST00000609775 533 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 MIR6798-201ENST00000612887 67 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC008759.3-201ENST00000613300 508 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 RMST_10.1-201ENST00000616309 154 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 RN7SL722P-201ENST00000617780 284 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 RN7SL565P-201ENST00000618246 284 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC084824.4-201ENST00000620106 731 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC008432.1-201ENST00000615912 1320 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 PABPC1P6-201ENST00000445594 1829 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 AC007342.7-201ENST00000624610 2337 ntBASIC4.16□□□□□ -1.74
NDE1Q9NXR1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NDE1Q9NXR1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NDE1Q9NXR1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
NDE1Q9NXR1 AC090017.1-201ENST00000548612 1779 ntBASIC4.15□□□□□ -1.74
NDE1Q9NXR1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AC021146.4-201ENST00000309229 279 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AL391361.1-201ENST00000405580 489 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 RNU4-74P-201ENST00000411280 161 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 BX510359.3-201ENST00000422168 306 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 PNRC2P1-201ENST00000423940 420 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 MTCYBP32-201ENST00000427945 1084 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 PSMD10P3-201ENST00000437000 448 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 CNOT7P2-201ENST00000441051 832 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 YWHAQP9-201ENST00000445891 512 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AL606517.1-201ENST00000446914 387 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 HMGB1P26-201ENST00000452520 628 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 RN7SL610P-201ENST00000463845 291 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 RPL21P47-201ENST00000483696 477 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 PRELID3BP6-201ENST00000503839 571 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AC025459.1-201ENST00000504072 156 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 HIGD1AP14-201ENST00000507617 282 ntBASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.15□□□□□ -1.75
NDE1Q9NXR1 AP001880.2-201ENST00000538233 448 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms