Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC004908.1-201ENST00000606572 541 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AL359757.2-201ENST00000624309 274 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC129915.3-201ENST00000634128 948 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC140479.4-205ENST00000636339 820 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC006020.1-201ENST00000420179 1854 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 ZNF658B-201ENST00000602828 3408 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 CASC19-246ENST00000641625 1606 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC027228.2-201ENST00000567141 2154 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 NUP58P1-201ENST00000502546 1738 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AP000756.2-201ENST00000624168 2567 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AL157777.2-201ENST00000258070 137 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 RNU6-1097P-201ENST00000363586 107 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 Y_RNA.339-201ENST00000365325 102 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 MRPL42P3-201ENST00000401492 326 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 MIR1282-201ENST00000408865 101 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 RN7SKP247-201ENST00000411094 308 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC113412.1-201ENST00000425840 504 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 TXNP1-201ENST00000441872 371 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AL035666.1-201ENST00000446195 348 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 TRGVB-201ENST00000453257 471 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AKR1D1P1-201ENST00000457236 936 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 RPL7P22-201ENST00000466005 733 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC104564.1-201ENST00000493028 407 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 RN7SL187P-201ENST00000495587 303 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 RNU6-976P-201ENST00000516086 111 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 RNU6-201P-201ENST00000517100 61 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC105031.1-201ENST00000518550 476 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 NRBF2P4-201ENST00000520874 850 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AP000889.1-201ENST00000530968 660 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 APOOP3-201ENST00000536787 586 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 SNORA70D-201ENST00000578836 135 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC024267.2-201ENST00000582737 417 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AC018462.2-201ENST00000605375 395 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AL354950.2-201ENST00000617939 290 ntBASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CUEDC1Q9NWM3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 PPBPP2-201ENST00000513150 1362 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 AC011493.1-201ENST00000596753 1632 ntBASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CUEDC1Q9NWM3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms