Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 AC090151.1-201ENST00000520784 730 ntBASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 CYB5AP5-201ENST00000549779 389 ntBASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 BNIP3P31-201ENST00000604515 566 ntBASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 AC009948.4-201ENST00000604692 675 ntBASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 MAPK10-349ENST00000641767 3661 ntBASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 AL592148.3-201ENST00000608771 2646 ntBASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 AC012618.3-205ENST00000637896 1496 ntBASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5□□□□□ -1.61
BLOC1S4Q9NUP1 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 RAD17P1-201ENST00000418130 2042 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 EIF2AP4-201ENST00000424793 1781 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 RNU6-1257P-201ENST00000384625 110 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AC062016.2-201ENST00000420950 676 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AC004448.2-201ENST00000422360 586 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 RPS12P10-201ENST00000427031 377 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AC008065.1-201ENST00000428525 348 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AL772161.1-201ENST00000439130 476 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 RPL7P32-201ENST00000457119 744 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 OR8G5-201ENST00000524943 1041 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 CYP2C60P-201ENST00000566088 139 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AP005119.2-201ENST00000579735 1105 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 MIR3908-201ENST00000579798 126 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AC069061.3-201ENST00000582254 823 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 SLC25A36P1-201ENST00000590111 465 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AC133794.1-201ENST00000602731 914 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AL160290.3-201ENST00000604869 165 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AC116651.1-201ENST00000609724 556 ntBASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
BLOC1S4Q9NUP1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 RNU5B-4P-201ENST00000363508 111 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 RNA5SP332-201ENST00000391063 115 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 TMSB4XP8-201ENST00000402089 135 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 RPS16P5-201ENST00000406501 404 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 TMSB4XP6-201ENST00000415187 135 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 TMSB4XP1-201ENST00000424567 135 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC000041.1-201ENST00000439655 175 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 HMGN1P5-201ENST00000448591 263 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC053481.1-201ENST00000467217 306 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 RN7SL346P-201ENST00000491561 294 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 RNU6-488P-201ENST00000515918 99 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 RPL23AP97-201ENST00000568955 471 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC017100.2-201ENST00000584628 355 ntBASIC4.98□□□□□ -1.61
BLOC1S4Q9NUP1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms