Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 Y_RNA.301-201ENST00000364990 103 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 Y_RNA.326-201ENST00000365176 113 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 H2AFZP3-201ENST00000394213 387 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 RN7SKP144-201ENST00000411108 279 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 POLHP1-201ENST00000411806 470 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 AL591848.1-201ENST00000413092 322 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 AL022100.1-202ENST00000421214 548 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 ACTBP12-201ENST00000435871 418 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 CYCSP43-201ENST00000438233 310 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 OR5S1P-201ENST00000453063 951 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 RN7SL472P-201ENST00000492799 293 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 OR7E163P-201ENST00000505943 894 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 AC109635.4-202ENST00000531666 412 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 MIR4314-201ENST00000583321 92 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 FKBP1AP1-201ENST00000594588 318 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 RPS27AP19-201ENST00000597285 458 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 MIR7162-201ENST00000611134 69 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC8.59□□□□□ -1.03
RTN4Q9NQC3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC8.59□□□□□ -1.03
RTN4Q9NQC3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.04
RTN4Q9NQC3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC8.59□□□□□ -1.04
RTN4Q9NQC3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC8.59□□□□□ -1.04
RTN4Q9NQC3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
RTN4Q9NQC3 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AL136531.3-201ENST00000624378 3658 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 RNA5SP78-201ENST00000364622 118 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 Y_RNA.378-201ENST00000365652 113 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 SNORD3J-201ENST00000408473 190 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AC006455.7-201ENST00000422502 392 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AL354983.1-201ENST00000434580 906 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 RPS28P8-201ENST00000435020 208 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 MTCYBP6-201ENST00000441810 138 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 PRPS1P1-201ENST00000445305 876 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AC116533.1-201ENST00000459748 321 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 PPIAP19-201ENST00000486414 492 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 RNU6-352P-201ENST00000516908 107 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AP003072.1-201ENST00000531740 145 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AC007751.2-201ENST00000534173 291 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AC083837.1-201ENST00000565297 2994 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 BNIP3P25-201ENST00000596023 559 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AC012669.1-201ENST00000603209 283 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AC012409.4-201ENST00000612923 249 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AL450472.3-201ENST00000615578 367 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AL359547.2-201ENST00000615810 418 ntBASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 FAM240B-202ENST00000637691 966 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 API5-210ENST00000534600 1760 ntTSL 5 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
RTN4Q9NQC3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
RTN4Q9NQC3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms