Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 USP9YP12-201ENST00000450481 570 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 MEMO1P4-201ENST00000453590 386 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC093166.4-201ENST00000457867 318 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 snoU109.1-201ENST00000459339 135 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC073610.1-201ENST00000489971 396 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 RN7SL57P-201ENST00000493687 290 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 RNF138P1-201ENST00000502765 546 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC108078.1-201ENST00000508073 725 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 SCARNA15.1-201ENST00000516384 125 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 SNORA18.6-201ENST00000516792 115 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL121594.2-201ENST00000541658 472 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC092121.1-201ENST00000569452 202 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL163952.1-202ENST00000569625 600 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL136131.3-201ENST00000607600 188 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AL592295.2-201ENST00000612578 206 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AP002505.2-201ENST00000623585 696 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC068880.5-201ENST00000624331 290 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC093591.3-201ENST00000634516 308 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 MKKS-204ENST00000639674 192 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC015689.2-201ENST00000528172 1738 ntBASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SEC61A2Q9H9S3 AC125336.1-201ENST00000508893 2827 ntBASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 AL137058.3-201ENST00000624531 3099 ntBASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 AC027088.4-201ENST00000611559 1947 ntBASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 CDR1-202ENST00000625883 1485 ntBASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SEC61A2Q9H9S3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 OR4K15-201ENST00000305051 1216 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 SNORA5.1-201ENST00000384275 131 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 MIR1203-201ENST00000408812 85 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 RN7SKP285-201ENST00000410137 318 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 Y_RNA.598-201ENST00000410480 95 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 RNA5SP498-201ENST00000411342 120 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 METTL15P3-201ENST00000415522 1221 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 LINC00993-201ENST00000420453 540 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 RPS27AP14-201ENST00000422868 454 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 AC126120.1-201ENST00000431082 470 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 RPS29P14-201ENST00000431518 171 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 BMS1P19-201ENST00000433925 393 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 NPM1P39-201ENST00000449818 867 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 FRG2FP-204ENST00000453982 852 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 RPL12P39-201ENST00000455456 496 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 ACA64.1-201ENST00000459171 127 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 MTCYBP17-201ENST00000503579 789 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 AC097173.1-201ENST00000505862 819 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 HMGB1P28-201ENST00000507778 552 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 AC114786.4-201ENST00000508771 728 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 MTCO1P35-201ENST00000515270 228 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 Y_RNA.704-201ENST00000516851 102 ntBASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.15□□□□□ -1.59
SEC61A2Q9H9S3 AP005639.2-201ENST00000527592 928 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms