Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC009597.2-201ENST00000604659 592 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AL159169.3-201ENST00000608871 561 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC005899.7-201ENST00000618199 588 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC007342.8-201ENST00000623278 678 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 AC099654.14-201ENST00000638599 341 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BCAS3Q9H6U6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 RNA5SP455-201ENST00000365190 119 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 MIR181A1-201ENST00000385026 110 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 SNORD65.1-201ENST00000390889 71 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 PIGPP2-201ENST00000411569 458 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC245052.5-201ENST00000416320 649 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 MTND4LP16-201ENST00000440828 295 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 RN7SL591P-201ENST00000496150 292 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 RNU6-1308P-201ENST00000516817 103 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC012400.1-201ENST00000518452 381 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 IGHV3-32-201ENST00000519182 355 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC087808.1-201ENST00000520501 361 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AP003080.1-202ENST00000526526 915 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 MIR4691-201ENST00000583764 85 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC011626.1-201ENST00000604710 562 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC005962.2-201ENST00000611427 652 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC009120.7-201ENST00000623452 780 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 AC020656.2-201ENST00000613291 5309 ntBASIC5.86□□□□□ -1.47
BCAS3Q9H6U6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 RNU6-348P-201ENST00000384386 107 ntBASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 AC093084.1-201ENST00000424233 687 ntBASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.85□□□□□ -1.47
BCAS3Q9H6U6 HSPE1P16-201ENST00000426640 348 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms