Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC133963.2-201ENST00000513686 578 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 RNU6-1129P-201ENST00000515964 104 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AP006289.1-201ENST00000538089 277 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC124068.1-201ENST00000563131 678 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 RPL23AP97-201ENST00000568955 471 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 HMGB2P1-201ENST00000591146 634 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC068790.6-201ENST00000602558 258 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 DPRXP5-201ENST00000604662 539 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AL138478.1-201ENST00000612252 832 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC123767.1-202ENST00000620407 817 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC103706.2-201ENST00000638080 240 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC005261.4-201ENST00000600047 1385 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 RNU5B-1-201ENST00000363286 116 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 RNU1-130P-201ENST00000363930 160 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AL035419.1-201ENST00000397037 564 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AL355379.1-201ENST00000405542 640 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AL445183.3-201ENST00000414168 502 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 MTND2P4-201ENST00000445034 1004 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AC107401.1-201ENST00000503426 685 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 RPF2P2-201ENST00000504693 896 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 MTCYBP37-201ENST00000510642 1133 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AC117532.1-201ENST00000514638 323 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 MTND2P26-201ENST00000528255 1029 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 OR8I1P-201ENST00000529291 931 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AC063949.1-201ENST00000552900 865 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AC027807.1-201ENST00000559921 996 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 MRPS35P3-201ENST00000603189 709 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AC105129.3-201ENST00000605455 485 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 TUSC7.1-201ENST00000610969 165 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AL161616.1-201ENST00000611867 286 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AP000676.3-201ENST00000623299 569 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 ELL2P3-201ENST00000457883 1602 ntBASIC5.51□□□□□ -1.53
SALL3Q9BXA9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SALL3Q9BXA9 AC104260.2-201ENST00000623551 3497 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 SNORD56.4-201ENST00000363883 71 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 RNA5SP505-201ENST00000364748 108 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 Z98745.1-201ENST00000402553 494 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 MTND4P3-201ENST00000417829 541 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 AL365203.2-201ENST00000423444 196 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 MTND4P20-201ENST00000424125 869 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 AL589823.1-201ENST00000429577 183 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 AC010153.1-201ENST00000432862 727 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 AL353706.1-201ENST00000436728 494 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.5□□□□□ -1.53
SALL3Q9BXA9 AL138787.1-202ENST00000437804 898 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.5□□□□□ -1.53
SALL3Q9BXA9 RPS27P5-201ENST00000444247 244 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.5□□□□□ -1.53
SALL3Q9BXA9 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.5□□□□□ -1.53
SALL3Q9BXA9 MRPL35P4-201ENST00000453682 566 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms