Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VRK1Q99986 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK1Q99986 RN7SKP145-201ENST00000363291 303 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 RNU1-146P-201ENST00000364015 165 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK1Q99986 RNU6-921P-201ENST00000384361 107 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VRK1Q99986 DSTNP4-201ENST00000399472 474 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 RN7SKP229-201ENST00000410465 302 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 RN7SKP29-201ENST00000410957 272 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 MRPL53P1-201ENST00000414323 319 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK1Q99986 RPS3AP44-201ENST00000425466 790 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK1Q99986 AL158073.1-201ENST00000426848 1104 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 CRIP1P1-201ENST00000427567 185 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK1Q99986 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK1Q99986 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK1Q99986 LARP1BP3-201ENST00000437229 869 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AC092641.1-201ENST00000440229 772 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK1Q99986 RPS26P56-201ENST00000444468 240 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 BMI1P1-201ENST00000445879 941 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 ST13P20-201ENST00000447996 1065 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK1Q99986 RPL12P39-201ENST00000455456 496 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 SNRPGP9-201ENST00000456025 225 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 MTCO3P2-201ENST00000457365 171 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AC093166.4-201ENST00000457867 318 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AC010301.1-201ENST00000473936 355 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 RN7SL273P-201ENST00000481561 299 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 RPS4XP15-201ENST00000489210 795 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AL136038.1-201ENST00000497246 351 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VRK1Q99986 NPM1P6-201ENST00000521088 871 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK1Q99986 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK1Q99986 CYCSP28-201ENST00000534284 321 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK1Q99986 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK1Q99986 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.99□□□□□ -1.61
VRK1Q99986 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK1Q99986 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK1Q99986 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK1Q99986 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK1Q99986 NF1P5-201ENST00000588287 448 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.99□□□□□ -1.61
VRK1Q99986 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.99□□□□□ -1.61
VRK1Q99986 AC022146.1-201ENST00000595307 847 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 NANOGP3-201ENST00000605855 286 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AL139286.2-201ENST00000606838 396 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK1Q99986 MIR6768-201ENST00000610734 72 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AC243773.3-201ENST00000613270 256 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AC100793.4-201ENST00000613683 429 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AC008115.3-201ENST00000614874 549 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.99□□□□□ -1.61
VRK1Q99986 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VRK1Q99986 AL359740.1-201ENST00000624340 592 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 AL356121.2-201ENST00000624715 780 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK1Q99986 AC025048.6-202ENST00000627667 438 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 OR11H2-202ENST00000641517 1085 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 LINC01739-205ENST00000641890 573 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
VRK1Q99986 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
VRK1Q99986 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK1Q99986 MTND5P29-201ENST00000458676 1807 ntBASIC4.99□□□□□ -1.61
VRK1Q99986 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VRK1Q99986 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK1Q99986 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.99□□□□□ -1.61
VRK1Q99986 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
VRK1Q99986 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.99□□□□□ -1.61
VRK1Q99986 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VRK1Q99986 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK1Q99986 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VRK1Q99986 AC135352.1-201ENST00000506173 1418 ntBASIC4.98□□□□□ -1.61
VRK1Q99986 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.98□□□□□ -1.61
VRK1Q99986 AC117529.2-201ENST00000512159 2068 ntBASIC4.98□□□□□ -1.61
VRK1Q99986 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK1Q99986 MTCO1P23-201ENST00000415223 1526 ntBASIC4.98□□□□□ -1.61
VRK1Q99986 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VRK1Q99986 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.98□□□□□ -1.61
VRK1Q99986 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.98□□□□□ -1.61
VRK1Q99986 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VRK1Q99986 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK1Q99986 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.98□□□□□ -1.61
VRK1Q99986 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK1Q99986 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
VRK1Q99986 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK1Q99986 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VRK1Q99986 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VRK1Q99986 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK1Q99986 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK1Q99986 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VRK1Q99986 RNA5SP500-201ENST00000364486 119 ntBASIC4.98□□□□□ -1.61
VRK1Q99986 RNU4-2-201ENST00000365668 141 ntBASIC4.98□□□□□ -1.61
VRK1Q99986 RNU6-657P-201ENST00000383904 107 ntBASIC4.98□□□□□ -1.61
VRK1Q99986 RNU6-723P-201ENST00000383973 107 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms