Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC009063.1-201ENST00000563342 702 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 FGF7P1-201ENST00000582820 288 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC018714.1-201ENST00000605028 208 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 MIR6133-201ENST00000617057 108 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC009704.2-201ENST00000618739 483 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC018445.2-201ENST00000622987 260 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC015726.3-201ENST00000624501 418 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 OR5H6-203ENST00000642105 978 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AP000776.1-201ENST00000530032 1663 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 ELF2P3-201ENST00000445099 1506 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 ABCC13-202ENST00000463099 3842 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC092326.2-201ENST00000624772 1561 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC083843.2-201ENST00000568248 6253 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC003985.2-201ENST00000562268 1669 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 IL6STP1-201ENST00000346911 1020 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 MIR365B-201ENST00000362317 111 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 RNA5SP507-201ENST00000363603 121 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 RNU1-146P-201ENST00000364015 165 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 XGY1-201ENST00000381172 446 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 RN7SKP213-201ENST00000410746 298 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC002524.1-201ENST00000411687 547 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 EIF4A1P1-201ENST00000420241 934 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC009480.2-201ENST00000422916 432 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 CYCSP46-201ENST00000423569 204 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 MTND1P30-201ENST00000441241 901 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC005532.2-201ENST00000467154 373 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC079382.1-201ENST00000493346 557 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 FAM92A1P2-202ENST00000504766 877 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 HMGN1P9-201ENST00000515212 298 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 SCARNA15.1-201ENST00000516384 125 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 MTCO3P15-201ENST00000526563 574 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 HMGN2P6-201ENST00000551091 273 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AL121839.1-201ENST00000556233 1185 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 TAS2R6P-201ENST00000605022 826 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AL022394.1-201ENST00000606979 292 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC037198.3-201ENST00000616754 526 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AF001550.2-201ENST00000636643 217 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 CUL4AP1-201ENST00000514750 1863 ntBASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms