Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VPS33AQ96AX1 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AL442639.1-201ENST00000625030 1899 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 RN7SKP95-201ENST00000362860 303 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 RN7SKP167-201ENST00000411047 285 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AL450992.3-201ENST00000413192 568 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 RPS15AP40-201ENST00000419621 391 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 OR2B7P-201ENST00000429302 934 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 RPS26P56-201ENST00000444468 240 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 RPS27AP15-201ENST00000447672 466 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 RPL37P6-202ENST00000464216 403 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 RPL21P103-201ENST00000479921 488 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 RNU1-6P-201ENST00000516290 144 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 RNA5SP92-201ENST00000516437 110 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 RN7SKP66-201ENST00000516681 231 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 NIFKP8-201ENST00000560500 874 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC023825.1-201ENST00000566704 1030 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 TMF1P1-201ENST00000576058 373 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC099785.1-201ENST00000605697 437 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AP002802.2-201ENST00000605877 235 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC009452.1-201ENST00000640823 606 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 MTND5P28-201ENST00000438005 1594 ntBASIC4.44□□□□□ -1.7
VPS33AQ96AX1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS33AQ96AX1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 NCLP2-201ENST00000416078 1462 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 RNA5SP151-201ENST00000365632 117 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 DSTNP4-201ENST00000399472 474 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 MTCO2P31-201ENST00000402702 684 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 RPL31P45-201ENST00000419532 356 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 RPS12P23-201ENST00000419579 400 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 YWHAZP8-201ENST00000436935 731 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 RAB11AP1-201ENST00000442978 646 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 NAP1L1P3-201ENST00000462291 880 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC090142.1-201ENST00000465776 462 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC005532.2-201ENST00000467154 373 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC087385.1-201ENST00000475062 312 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC025164.1-201ENST00000496249 478 ntBASIC4.43□□□□□ -1.7
VPS33AQ96AX1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS33AQ96AX1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms