Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MTCO2P31-201ENST00000402702 684 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 RNU4-22P-201ENST00000411058 166 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 RAB28P1-201ENST00000411517 641 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 BTF3P8-201ENST00000414577 526 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 RPL22P18-201ENST00000417197 377 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 BX510359.2-201ENST00000417920 305 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 OR2X1P-201ENST00000421144 687 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 RPL36AP10-201ENST00000421785 322 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 NRBF2P3-201ENST00000432731 865 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 ARL5AP2-201ENST00000444698 533 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 AL050341.1-201ENST00000447743 313 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC244505.3-201ENST00000454598 187 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 AL356981.1-201ENST00000454879 684 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATP2A3Q93084 RN7SL459P-201ENST00000481078 302 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 UBA52P3-201ENST00000491303 382 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 RN7SL346P-201ENST00000491561 294 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC005351.1-201ENST00000511152 786 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 RN7SKP276-201ENST00000516242 268 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 UBTFL10-201ENST00000528532 562 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 AP001880.2-201ENST00000538233 448 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC095057.3-201ENST00000567102 1157 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 GAS5-AS1-201ENST00000602767 694 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC013468.1-201ENST00000608680 598 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC100847.1-201ENST00000611316 481 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 MIR378J-201ENST00000611988 109 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC123768.4-201ENST00000616244 701 ntBASIC5.08□□□□□ -1.6
ATP2A3Q93084 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATP2A3Q93084 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATP2A3Q93084 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATP2A3Q93084 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
ATP2A3Q93084 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATP2A3Q93084 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATP2A3Q93084 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATP2A3Q93084 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ATP2A3Q93084 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATP2A3Q93084 RNU1-32P-201ENST00000363937 159 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 RNU4-28P-201ENST00000364739 141 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATP2A3Q93084 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AC114755.2-201ENST00000413520 361 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 DNAJC19P7-201ENST00000428811 344 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AL359265.2-201ENST00000434367 631 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AL450023.3-201ENST00000440592 271 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 TXNP5-201ENST00000441043 315 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 CYCSP34-201ENST00000458172 304 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AC011037.1-201ENST00000483964 558 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AC116553.2-201ENST00000564203 463 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 CYP2C60P-201ENST00000566088 139 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 MTND4LP24-201ENST00000572277 291 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.07□□□□□ -1.6
ATP2A3Q93084 AC233702.9-201ENST00000581528 203 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 BNIP3P24-201ENST00000593398 557 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 AC008745.1-201ENST00000604064 271 ntBASIC5.07□□□□□ -1.6
ATP2A3Q93084 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms