Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPL35AP24-201ENST00000413846 330 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC4Q92889 AL009174.1-201ENST00000426577 416 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC4Q92889 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC4Q92889 AL935212.3-201ENST00000450729 284 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 AL606490.1-201ENST00000452266 765 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 DNAJB5P1-201ENST00000454004 806 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 AC079168.1-201ENST00000458741 345 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 SIAH1P1-201ENST00000479411 923 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC4Q92889 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC4Q92889 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC4Q92889 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC4Q92889 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC4Q92889 EIF4A2P5-201ENST00000529914 499 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.81□□□□□ -1.48
ERCC4Q92889 AC090022.1-201ENST00000546569 311 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.81□□□□□ -1.48
ERCC4Q92889 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC4Q92889 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC4Q92889 AC073544.2-201ENST00000601155 540 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 AC107304.1-201ENST00000604229 296 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 AC009220.3-201ENST00000604318 586 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC4Q92889 AC118658.2-201ENST00000618697 459 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
ERCC4Q92889 AC090582.1-201ENST00000636321 199 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC4Q92889 AC005539.1-201ENST00000443768 1479 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC4Q92889 AP001642.1-201ENST00000624727 2117 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 AC092747.4-201ENST00000620519 1861 ntBASIC5.81□□□□□ -1.48
ERCC4Q92889 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC4Q92889 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC4Q92889 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC4Q92889 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC4Q92889 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.8□□□□□ -1.48
ERCC4Q92889 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.8□□□□□ -1.48
ERCC4Q92889 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC4Q92889 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ERCC4Q92889 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ERCC4Q92889 MAPK10-320ENST00000641462 6696 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.8□□□□□ -1.48
ERCC4Q92889 NCLP2-201ENST00000416078 1462 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC4Q92889 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC4Q92889 OR5H15-201ENST00000383696 930 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 Y_RNA.553-201ENST00000384670 102 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 RNU1-149P-201ENST00000390870 161 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 RNU6-920P-201ENST00000410926 92 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 AC007738.1-201ENST00000413892 348 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 GAPDHP49-201ENST00000421421 961 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 AC079355.1-201ENST00000421770 223 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC4Q92889 AL022400.1-201ENST00000423946 935 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 CYCSP12-201ENST00000437729 300 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 GAPDHP58-201ENST00000438477 1006 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.8□□□□□ -1.48
ERCC4Q92889 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.8□□□□□ -1.48
ERCC4Q92889 RPL7P48-201ENST00000461513 746 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC4Q92889 ACTG1P13-201ENST00000486987 1043 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC4Q92889 RN7SL466P-201ENST00000497546 295 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC4Q92889 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC4Q92889 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
ERCC4Q92889 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.8□□□□□ -1.48
ERCC4Q92889 AC060788.1-201ENST00000521318 469 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 AC126177.5-201ENST00000549599 178 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.8□□□□□ -1.48
ERCC4Q92889 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.8□□□□□ -1.48
ERCC4Q92889 AC010546.1-201ENST00000569391 485 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 AC006539.2-201ENST00000601729 572 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 AP003465.2-201ENST00000602571 373 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 AL589674.2-201ENST00000604304 337 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 AP005432.2-201ENST00000608162 586 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.8□□□□□ -1.48
ERCC4Q92889 MIR8080-201ENST00000622224 89 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.8□□□□□ -1.48
ERCC4Q92889 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
ERCC4Q92889 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC4Q92889 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC4Q92889 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
ERCC4Q92889 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
ERCC4Q92889 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.8□□□□□ -1.48
ERCC4Q92889 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.8□□□□□ -1.48
ERCC4Q92889 MTND5P24-201ENST00000438892 1767 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC4Q92889 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.8□□□□□ -1.48
ERCC4Q92889 MTND4P34-201ENST00000572715 1371 ntBASIC5.8□□□□□ -1.48
ERCC4Q92889 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.8□□□□□ -1.48
ERCC4Q92889 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.79□□□□□ -1.48
ERCC4Q92889 AC235565.1-201ENST00000456962 1325 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 AL672167.1-205ENST00000641112 3080 ntBASIC5.79□□□□□ -1.48
ERCC4Q92889 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
ERCC4Q92889 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms