Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A1Q8WWI5 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A1Q8WWI5 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A1Q8WWI5 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC44A1Q8WWI5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC44A1Q8WWI5 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC44A1Q8WWI5 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SLC44A1Q8WWI5 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC073055.1-201ENST00000456901 1621 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 LINC00622-201ENST00000562811 1570 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 ZNF29P-201ENST00000225587 168 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 RNU6-98P-201ENST00000384173 107 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 LINC01881-201ENST00000416103 412 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 OR2X1P-201ENST00000421144 687 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 GTF2IP2-201ENST00000424290 697 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 RPL31P44-201ENST00000447680 377 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 OR1H1P-201ENST00000448731 937 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC098826.2-201ENST00000452011 651 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 RPS3AP53-201ENST00000454716 778 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC104763.1-201ENST00000475274 360 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC093720.1-201ENST00000505681 714 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC007016.1-201ENST00000512110 244 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC119751.1-201ENST00000513357 765 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 RNU2-30P-201ENST00000516209 141 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 RN7SKP265-201ENST00000516448 223 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 HMGB1P1-201ENST00000522557 636 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC104417.1-201ENST00000523974 751 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC021006.3-201ENST00000530771 192 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AP001880.2-201ENST00000538233 448 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 RPL23AP97-201ENST00000568955 471 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC022884.3-201ENST00000579571 248 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AL445435.1-201ENST00000604232 665 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 RNU4-5P-201ENST00000607255 135 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 FAM25E-202ENST00000608562 189 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC024595.1-201ENST00000623088 387 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC091953.3-201ENST00000623220 236 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 U3.53-201ENST00000628922 216 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 AC125257.1-201ENST00000560400 2930 ntBASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SLC44A1Q8WWI5 MTND4P26-201ENST00000415971 1359 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 RNA5SP191-201ENST00000362585 102 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 RNA5SP307-201ENST00000362863 116 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AL035419.1-201ENST00000397037 564 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 SNORA74C-2-201ENST00000411179 201 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 EIF4A1P3-201ENST00000411521 244 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 NANOGP5-201ENST00000424456 877 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 IPMKP1-201ENST00000425988 855 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 MTCO3P21-201ENST00000430791 643 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AL035246.1-201ENST00000433554 1255 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC006466.1-201ENST00000438721 289 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 PTGES3P1-201ENST00000439531 483 ntBASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC44A1Q8WWI5 DDX39BP2-208ENST00000453923 258 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms