Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 GEMIN2P1-201ENST00000454246 752 ntBASIC10.18□□□□□ -0.78
TRIM41Q8WV44 HSPE1P22-201ENST00000456856 327 ntBASIC10.18□□□□□ -0.78
TRIM41Q8WV44 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 AC105029.1-201ENST00000520250 669 ntBASIC10.18□□□□□ -0.78
TRIM41Q8WV44 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 H3F3BP2-201ENST00000583907 357 ntBASIC10.18□□□□□ -0.78
TRIM41Q8WV44 HCG18-243ENST00000602498 327 ntTSL 3 BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 AL683813.2-201ENST00000605245 502 ntBASIC10.18□□□□□ -0.78
TRIM41Q8WV44 AC093788.1-201ENST00000609356 927 ntBASIC10.18□□□□□ -0.78
TRIM41Q8WV44 U6.107-201ENST00000637108 79 ntBASIC10.18□□□□□ -0.78
TRIM41Q8WV44 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 AC003985.2-201ENST00000562268 1669 ntBASIC10.18□□□□□ -0.78
TRIM41Q8WV44 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TRIM41Q8WV44 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC107982.1-201ENST00000507171 1300 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 RNU6-195P-201ENST00000411352 109 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AL662874.1-201ENST00000426065 230 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 DSTNP5-201ENST00000427921 523 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC007559.1-201ENST00000428736 355 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AL365400.1-201ENST00000431854 640 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 BMS1P19-201ENST00000433925 393 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AL590365.1-201ENST00000450788 243 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 Z82190.1-201ENST00000454534 490 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC096741.1-201ENST00000472250 846 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC023598.1-201ENST00000472521 361 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC135999.1-201ENST00000478962 479 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 MTND6P2-201ENST00000512226 524 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC108064.1-201ENST00000513791 460 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AP003122.4-201ENST00000530980 758 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 BNIP3P1-201ENST00000547295 580 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC011611.1-201ENST00000552179 197 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC136618.2-201ENST00000575091 400 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 MIR4301-201ENST00000577203 66 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AL603758.1-201ENST00000618654 241 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC011504.1-201ENST00000623331 4103 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
TRIM41Q8WV44 ZNF736P3Y-201ENST00000428264 1465 ntBASIC10.17□□□□□ -0.78
TRIM41Q8WV44 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 OR10R3P-201ENST00000361688 942 ntBASIC10.16□□□□□ -0.78
TRIM41Q8WV44 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 IL6-206ENST00000407492 926 ntTSL 3 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 AC112206.1-201ENST00000468416 477 ntBASIC10.16□□□□□ -0.78
TRIM41Q8WV44 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 MTND5P4-201ENST00000514978 288 ntBASIC10.16□□□□□ -0.78
TRIM41Q8WV44 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 AL162413.1-201ENST00000603198 110 ntBASIC10.16□□□□□ -0.78
TRIM41Q8WV44 AC011373.1-201ENST00000607270 237 ntBASIC10.16□□□□□ -0.78
TRIM41Q8WV44 MIR92B-201ENST00000607575 96 ntBASIC10.16□□□□□ -0.78
TRIM41Q8WV44 AC012254.3-201ENST00000591183 2117 ntBASIC10.16□□□□□ -0.78
TRIM41Q8WV44 FARSBP1-201ENST00000435808 1778 ntBASIC10.16□□□□□ -0.78
TRIM41Q8WV44 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC10.16□□□□□ -0.78
TRIM41Q8WV44 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
TRIM41Q8WV44 RNU1-32P-201ENST00000363937 159 ntBASIC10.15□□□□□ -0.78
TRIM41Q8WV44 RNU6-1122P-201ENST00000384449 107 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms