Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNED1Q8TER0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNED1Q8TER0 AC010266.2-201ENST00000564741 3255 ntBASIC4.87□□□□□ -1.63
SNED1Q8TER0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNED1Q8TER0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNED1Q8TER0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 AL121878.1-201ENST00000418638 859 ntBASIC4.87□□□□□ -1.63
SNED1Q8TER0 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 UBE2V2P1-201ENST00000434717 398 ntBASIC4.87□□□□□ -1.63
SNED1Q8TER0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 ARL4AP3-201ENST00000441452 574 ntBASIC4.87□□□□□ -1.63
SNED1Q8TER0 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 AC147055.1-201ENST00000509261 750 ntBASIC4.87□□□□□ -1.63
SNED1Q8TER0 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNED1Q8TER0 BTG4P1-201ENST00000510421 183 ntBASIC4.87□□□□□ -1.63
SNED1Q8TER0 AC110760.3-202ENST00000515177 371 ntBASIC4.87□□□□□ -1.63
SNED1Q8TER0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNED1Q8TER0 AL136520.1-202ENST00000555494 763 ntBASIC4.87□□□□□ -1.63
SNED1Q8TER0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNED1Q8TER0 AF131215.7-201ENST00000602443 707 ntBASIC4.87□□□□□ -1.63
SNED1Q8TER0 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 AC006249.1-201ENST00000621223 471 ntBASIC4.87□□□□□ -1.63
SNED1Q8TER0 AP000770.2-201ENST00000623694 100 ntBASIC4.87□□□□□ -1.63
SNED1Q8TER0 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.87□□□□□ -1.63
SNED1Q8TER0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNED1Q8TER0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNED1Q8TER0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNED1Q8TER0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNED1Q8TER0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNED1Q8TER0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNED1Q8TER0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNED1Q8TER0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNED1Q8TER0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNED1Q8TER0 RNU6-249P-201ENST00000363016 102 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 AC245052.5-201ENST00000416320 649 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 AL161631.1-201ENST00000417933 486 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 Z97055.1-201ENST00000419730 712 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 RAD23BP3-201ENST00000454157 1152 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNED1Q8TER0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 AC012158.1-204ENST00000483430 465 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 AC010460.2-201ENST00000509054 677 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 TPT1P8-201ENST00000510120 555 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 AC063950.1-201ENST00000552036 308 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 AL121839.1-201ENST00000556233 1185 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 MTND2P13-201ENST00000577438 1039 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 VN1R92P-201ENST00000598511 928 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 AC098483.2-201ENST00000603158 454 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 MIR432-201ENST00000606207 94 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 AC018754.1-201ENST00000607486 925 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 AC005344.1-201ENST00000613391 459 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNED1Q8TER0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNED1Q8TER0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
SNED1Q8TER0 TTC39DP-201ENST00000416781 1688 ntBASIC4.86□□□□□ -1.63
SNED1Q8TER0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNED1Q8TER0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 VN1R8P-201ENST00000407739 893 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 AC096644.3-201ENST00000416788 338 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 PDSS1P1-201ENST00000422953 1114 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 AC098826.2-201ENST00000452011 651 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 AGGF1P3-201ENST00000493675 1213 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 AC010374.2-201ENST00000512933 535 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 RN7SKP34-201ENST00000516142 244 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 AC026407.1-201ENST00000518369 204 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 AP000859.1-201ENST00000525536 307 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 OR4R2P-201ENST00000530815 597 ntBASIC4.85□□□□□ -1.63
SNED1Q8TER0 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.85□□□□□ -1.63
SNED1Q8TER0 AC093014.1-201ENST00000548926 724 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms